EnhancerDB
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  3. rs535525469[chr17:872892]
Enhancers that have rs535525469[chr17:872892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
chr17 872760 873162 vista23630
VISTA
Transcript factors that have rs535525469[chr17:872892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 872713 873232 ZNF274 GTRD no Liver (HepG2) 21739053
chr17 872713 873232 ZNF274 GTRD no Liver (HepG2) 108227851
chr17 872825 873015 SOX2 GTRD no Neural Stem Cells (H9) 21739054
chr17 872825 873015 SOX2 GTRD no Neural Stem Cells (H9) 108227852
chr17 872844 873220 ZNF274 GTRD no Bone Marrow (K562) 108227853
chr17 872862 873216 ZNF274 GTRD no Liver (HepG2) 21739055
chr17 872862 873216 ZNF274 GTRD no Liver (HepG2) 108227854
chr17 872868 873345 ZNF274 GTRD no Liver (HepG2) 21739056
chr17 872868 873345 ZNF274 GTRD no Liver (HepG2) 108227855
chr17 872881 872897 GLIS1 JASPAR yes 21179870
chr17 872881 872897 GLIS1 JASPAR yes 52647224
chr17 872889 872904 LEF1 JASPAR yes 21179871
chr17 872889 872904 LEF1 JASPAR yes 52647225
Genes associated with rs535525469[chr17:872892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More