EnhancerDB
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  3. vista23833[chr17:6396224-6396493]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23833[chr17:6396224-6396493]
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Tissue distribution of vista23833
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Transcription factor that possibly regulate vista23833[chr17:6396224-6396493]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 6396248 6396568 USF1 UCSC Txn Factor no Conserved 108233249
chr17 6396252 6396544 SP4 UCSC Txn Factor no Conserved 108233251
chr17 6396267 6396543 USF2 UCSC Txn Factor no Conserved 108233254
chr17 6396272 6396543 ATF3 UCSC Txn Factor no Conserved 108233259
chr17 6396227 6396242 FOXP1 JASPAR yes 21189848
chr17 6396227 6396242 FOXP1 JASPAR yes 52914833
chr17 6396229 6396235 TBP TRANSFAC yes 21189849
chr17 6396229 6396235 TBP TRANSFAC yes 52914834
chr17 6396230 6396245 FOXP1 JASPAR yes 21189850
chr17 6396230 6396245 FOXP1 JASPAR yes 52914835
chr17 6396232 6396247 FOXP1 JASPAR yes 21189851
chr17 6396232 6396247 FOXP1 JASPAR yes 52914836
chr17 6396234 6396246 FOXC2 JASPAR yes 21189852
chr17 6396234 6396246 FOXC2 JASPAR yes 52914837
chr17 6396235 6396249 ONECUT3 JASPAR yes 21189853
chr17 6396235 6396249 ONECUT3 JASPAR yes 52914838
chr17 6396237 6396246 SRY JASPAR yes 21189854
chr17 6396237 6396246 SRY JASPAR yes 52914839
chr17 6396239 6396248 SOX9 JASPAR yes 21189855
chr17 6396239 6396248 SOX9 JASPAR yes 52914840
chr17 6396271 6396287 NFYA JASPAR yes 21189856
chr17 6396271 6396287 NFYA JASPAR yes 52914841
chr17 6396274 6396288 ONECUT3 JASPAR yes 21189857
chr17 6396274 6396288 ONECUT3 JASPAR yes 52914842
chr17 6396274 6396289 NFYB JASPAR yes 21189858
chr17 6396274 6396289 NFYB JASPAR yes 52914843
chr17 6396307 6396315 FOXO3 JASPAR yes 21189859
chr17 6396307 6396315 FOXO3 JASPAR yes 52914844
chr17 6396314 6396329 NFYB JASPAR yes 21189860
chr17 6396314 6396329 NFYB JASPAR yes 52914845
chr17 6396316 6396332 NFYA JASPAR yes 21189861
chr17 6396316 6396332 NFYA JASPAR yes 52914846
chr17 6396317 6396335 NFYA JASPAR yes 21189862
chr17 6396317 6396335 NFYA JASPAR yes 52914847
chr17 6396318 6396330 PBX1 JASPAR yes 21189863
chr17 6396318 6396330 PBX1 JASPAR yes 52914848
chr17 6396321 6396325 H1TF2 TRANSFAC yes 21189864
chr17 6396321 6396325 NFE TRANSFAC yes 21189865
chr17 6396321 6396325 SRF TRANSFAC yes 21189866
chr17 6396321 6396325 H1TF2 TRANSFAC yes 52914849
chr17 6396321 6396325 NFE TRANSFAC yes 52914850
chr17 6396321 6396325 SRF TRANSFAC yes 52914851
chr17 6396332 6396345 ZBTB18 JASPAR yes 21189867
chr17 6396332 6396345 ZBTB18 JASPAR yes 52914852
chr17 6396343 6396349 TCF1 TRANSFAC yes 21189868
chr17 6396343 6396349 TCF1 TRANSFAC yes 52914853
chr17 6396358 6396369 EBF1 JASPAR yes 21189869
chr17 6396358 6396369 EBF1 JASPAR yes 52914854
chr17 6396367 6396378 USF1 JASPAR yes 21189870
chr17 6396367 6396378 USF2 JASPAR yes 21189871
chr17 6396367 6396378 USF1 JASPAR yes 52914855
chr17 6396367 6396378 USF2 JASPAR yes 52914856
chr17 6396368 6396378 SREBF2 JASPAR yes 21189872
chr17 6396368 6396378 TFE3 JASPAR yes 21189873
chr17 6396368 6396378 TFEB JASPAR yes 21189874
chr17 6396368 6396378 TFEC JASPAR yes 21189875
chr17 6396368 6396378 SREBF2 JASPAR yes 52914857
chr17 6396368 6396378 TFE3 JASPAR yes 52914858
chr17 6396368 6396378 TFEB JASPAR yes 52914859
chr17 6396368 6396378 TFEC JASPAR yes 52914860
chr17 6396368 6396379 USF1 JASPAR yes 21189876
chr17 6396368 6396379 USF1 JASPAR yes 52914861
chr17 6396378 6396392 RORA JASPAR yes 21189877
chr17 6396378 6396392 RORA JASPAR yes 52914862
chr17 6396386 6396390 ESR1 TRANSFAC yes 21189878
chr17 6396386 6396390 ESR1 TRANSFAC yes 52914863
chr17 6396386 6396397 USF1 JASPAR yes 21189879
chr17 6396386 6396397 USF1 JASPAR yes 52914864
chr17 6396387 6396397 BHLHE41 JASPAR yes 21189880
chr17 6396387 6396397 SREBF2 JASPAR yes 21189881
chr17 6396387 6396397 TFE3 JASPAR yes 21189882
chr17 6396387 6396397 TFEB JASPAR yes 21189883
chr17 6396387 6396397 TFEC JASPAR yes 21189884
chr17 6396387 6396397 BHLHE41 JASPAR yes 52914865
chr17 6396387 6396397 SREBF2 JASPAR yes 52914866
chr17 6396387 6396397 TFE3 JASPAR yes 52914867
chr17 6396387 6396397 TFEB JASPAR yes 52914868
chr17 6396387 6396397 TFEC JASPAR yes 52914869
chr17 6396387 6396398 USF1 JASPAR yes 21189885
chr17 6396387 6396398 USF2 JASPAR yes 21189886
chr17 6396387 6396398 USF1 JASPAR yes 52914870
chr17 6396387 6396398 USF2 JASPAR yes 52914871
chr17 6396396 6396407 ESRRA JASPAR yes 21189887
chr17 6396396 6396407 ESRRA JASPAR yes 52914872
chr17 6396405 6396409 ESR1 TRANSFAC yes 21189888
chr17 6396405 6396409 ESR1 TRANSFAC yes 52914873
chr17 6396413 6396419 SOX10 JASPAR yes 21189889
chr17 6396413 6396419 SOX10 JASPAR yes 52914874
chr17 6396416 6396430 RORA JASPAR yes 21189890
chr17 6396416 6396430 RORA JASPAR yes 52914875
chr17 6396419 6396429 RORA JASPAR yes 21189891
chr17 6396419 6396429 RORA JASPAR yes 52914876
chr17 6396424 6396428 ESR1 TRANSFAC yes 21189892
chr17 6396424 6396428 ESR1 TRANSFAC yes 52914877
chr17 6396424 6396435 USF1 JASPAR yes 21189893
chr17 6396424 6396435 USF1 JASPAR yes 52914878
chr17 6396425 6396435 TFEB JASPAR yes 21189894
chr17 6396425 6396435 TFEC JASPAR yes 21189895
chr17 6396425 6396435 TFEB JASPAR yes 52914879
chr17 6396425 6396435 TFEC JASPAR yes 52914880
chr17 6396425 6396436 USF2 JASPAR yes 21189896
chr17 6396425 6396436 USF2 JASPAR yes 52914881
chr17 6396442 6396453 USF1 JASPAR yes 21189897
chr17 6396442 6396453 USF2 JASPAR yes 21189898
chr17 6396442 6396453 USF1 JASPAR yes 52914882
chr17 6396442 6396453 USF2 JASPAR yes 52914883
chr17 6396443 6396453 BHLHE41 JASPAR yes 21189899
chr17 6396443 6396453 SREBF2 JASPAR yes 21189900
chr17 6396443 6396453 TFE3 JASPAR yes 21189901
chr17 6396443 6396453 TFEB JASPAR yes 21189902
chr17 6396443 6396453 TFEC JASPAR yes 21189903
chr17 6396443 6396453 BHLHE41 JASPAR yes 52914884
chr17 6396443 6396453 SREBF2 JASPAR yes 52914885
chr17 6396443 6396453 TFE3 JASPAR yes 52914886
chr17 6396443 6396453 TFEB JASPAR yes 52914887
chr17 6396443 6396453 TFEC JASPAR yes 52914888
chr17 6396443 6396454 USF1 JASPAR yes 21189904
chr17 6396443 6396454 USF1 JASPAR yes 52914889
chr17 6396447 6396462 HNF4G JASPAR yes 21189905
chr17 6396447 6396462 HNF4G JASPAR yes 52914890
chr17 6396448 6396462 NR2F1 JASPAR yes 21189906
chr17 6396448 6396462 NR2F1 JASPAR yes 52914891
chr17 6396448 6396463 HNF4A JASPAR yes 21189907
chr17 6396448 6396463 HNF4A JASPAR yes 52914892
chr17 6396471 6396478 JUN TRANSFAC yes 21189908
chr17 6396471 6396478 JUN TRANSFAC yes 52914893
chr17 6396487 6396503 RFX4 JASPAR yes 21189909
chr17 6396487 6396503 RFX4 JASPAR yes 52914894
SNP sites on vista23833[chr17:6396224-6396493]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 6396484 rs116341188 G C
ATF3 SP4 USF1 USF2
4724217
Genes possibly regulated by vista23833[chr17:6396224-6396493]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 6297013 6338519 - AIPL1 ENSG00000129221.10 6338519 0.96 0.92 15318 42295
chr17 6347735 6354789 + FAM64A ENSG00000129195.11 6347735 0.9 1.0 15319 51511
chr17 6354584 6459814 - PITPNM3 ENSG00000091622.11 6459814 0.93 1.0 15320 36679
Expression level of Genes
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miRNAs possibly regulated by vista23833[chr17:6396224-6396493]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results