EnhancerDB
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  3. rs116341188[chr17:6396484]
Enhancers that have rs116341188[chr17:6396484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6394222 6402711 enh4227
Prostate (RWPE1) Blood (OCI-LY7) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube)
chr17 6396224 6396493 vista23833
VISTA
Transcript factors that have rs116341188[chr17:6396484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6395883 6396573 TCF7L2 GTRD no Colon (HCT116) 108233243
chr17 6395896 6396546 ZNF143 GTRD no Epithelial (MCF-7) 108233245
chr17 6396141 6396661 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233246
chr17 6396215 6396591 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108233247
chr17 6396228 6396558 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233248
chr17 6396248 6396568 USF1 UCSC Txn Factor no Conserved 108233249
chr17 6396248 6396568 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233250
chr17 6396252 6396544 SP4 UCSC Txn Factor no Conserved 108233251
chr17 6396252 6396544 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233252
chr17 6396262 6396522 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108233253
chr17 6396267 6396543 USF2 UCSC Txn Factor no Conserved 108233254
chr17 6396267 6396543 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108233255
chr17 6396270 6396540 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233256
chr17 6396271 6396528 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108233257
chr17 6396272 6396502 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108233258
chr17 6396272 6396543 ATF3 UCSC Txn Factor no Conserved 108233259
chr17 6396287 6396609 ZNF143 GTRD no Epithelial (MCF-7) 108233260
chr17 6396289 6396511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108233261
chr17 6396289 6396530 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233262
chr17 6396289 6396665 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233263
chr17 6396292 6396531 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108233264
chr17 6396296 6396521 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108233265
chr17 6396329 6396500 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108233267
chr17 6396344 6396773 ZNF143 GTRD no Epithelial (MCF-7) 108233268
Genes associated with rs116341188[chr17:6396484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More