EnhancerDB
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  3. vista2386[chr1:90135818-90136060]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2386[chr1:90135818-90136060]
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Tissue distribution of vista2386
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Transcription factor that possibly regulate vista2386[chr1:90135818-90136060]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90135691 90136061 EP300 UCSC Txn Factor no Conserved 107813637
chr1 90135745 90136007 SPI1 UCSC Txn Factor no Conserved 107813647
chr1 90135865 90136038 BATF UCSC Txn Factor no Conserved 107813658
chr1 90135814 90135824 SREBF1 JASPAR yes 30611966
chr1 90135814 90135824 SREBF1 JASPAR yes 118325282
chr1 90135817 90135830 SMAD2 JASPAR yes 30611967
chr1 90135817 90135830 SMAD2 JASPAR yes 118325283
chr1 90135863 90135884 IRF1 JASPAR yes 30611968
chr1 90135863 90135884 IRF1 JASPAR yes 118325284
chr1 90135864 90135877 POU2F2 JASPAR yes 30611969
chr1 90135864 90135877 POU2F2 JASPAR yes 118325285
chr1 90135866 90135870 YY1 TRANSFAC yes 30611970
chr1 90135866 90135870 YY1 TRANSFAC yes 118325286
chr1 90135866 90135880 STAT1 JASPAR yes 30611971
chr1 90135866 90135880 STAT1 JASPAR yes 118325287
chr1 90135867 90135879 IRF1 JASPAR yes 30611972
chr1 90135867 90135879 IRF1 JASPAR yes 118325288
chr1 90135867 90135881 IRF7 JASPAR yes 30611973
chr1 90135867 90135881 IRF7 JASPAR yes 118325289
chr1 90135871 90135884 ELF3 JASPAR yes 30611974
chr1 90135871 90135884 ELF3 JASPAR yes 118325290
chr1 90135872 90135876 YY1 TRANSFAC yes 30611975
chr1 90135872 90135876 YY1 TRANSFAC yes 118325291
chr1 90135872 90135883 ELF5 JASPAR yes 30611976
chr1 90135872 90135883 ELF5 JASPAR yes 118325292
chr1 90135872 90135884 EHF JASPAR yes 30611977
chr1 90135872 90135884 ELF1 JASPAR yes 30611978
chr1 90135872 90135884 ELF4 JASPAR yes 30611979
chr1 90135872 90135884 EHF JASPAR yes 118325293
chr1 90135872 90135884 ELF1 JASPAR yes 118325294
chr1 90135872 90135884 ELF4 JASPAR yes 118325295
chr1 90135872 90135885 ELF1 JASPAR yes 30611980
chr1 90135872 90135885 ELF1 JASPAR yes 118325296
chr1 90135872 90135886 SPIC JASPAR yes 30611981
chr1 90135872 90135886 SPIC JASPAR yes 118325297
chr1 90135874 90135880 ETS1 JASPAR yes 30611982
chr1 90135874 90135880 ETS1 JASPAR yes 118325298
chr1 90135880 90135884 YY1 TRANSFAC yes 30611983
chr1 90135880 90135884 YY1 TRANSFAC yes 118325299
chr1 90135882 90135890 GATA3 JASPAR yes 30611984
chr1 90135882 90135890 GATA3 JASPAR yes 118325300
chr1 90135889 90135908 RFX2 JASPAR yes 30611985
chr1 90135889 90135908 RFX2 JASPAR yes 118325301
chr1 90135891 90135906 RFX5 JASPAR yes 30611986
chr1 90135891 90135906 RFX5 JASPAR yes 118325302
chr1 90135893 90135909 RFX2 JASPAR yes 30611987
chr1 90135893 90135909 RFX3 JASPAR yes 30611988
chr1 90135893 90135909 RFX4 JASPAR yes 30611989
chr1 90135893 90135909 RFX5 JASPAR yes 30611990
chr1 90135893 90135909 RFX2 JASPAR yes 118325303
chr1 90135893 90135909 RFX3 JASPAR yes 118325304
chr1 90135893 90135909 RFX4 JASPAR yes 118325305
chr1 90135893 90135909 RFX5 JASPAR yes 118325306
chr1 90135894 90135913 RFX2 JASPAR yes 30611991
chr1 90135894 90135913 RFX2 JASPAR yes 118325307
chr1 90135901 90135905 LFA1 TRANSFAC yes 30611992
chr1 90135901 90135905 LFA1 TRANSFAC yes 118325308
chr1 90135910 90135926 SOX4 JASPAR yes 30611993
chr1 90135910 90135926 SOX4 JASPAR yes 118325309
chr1 90135910 90135931 IRF1 JASPAR yes 30611994
chr1 90135910 90135931 IRF1 JASPAR yes 118325310
chr1 90135912 90135927 PRDM1 JASPAR yes 30611995
chr1 90135912 90135927 STAT2 JASPAR yes 30611996
chr1 90135912 90135927 PRDM1 JASPAR yes 118325311
chr1 90135912 90135927 STAT2 JASPAR yes 118325312
chr1 90135913 90135924 PHOX2A JASPAR yes 30611997
chr1 90135913 90135924 PROP1 JASPAR yes 30611998
chr1 90135913 90135924 PHOX2A JASPAR yes 118325313
chr1 90135913 90135924 PROP1 JASPAR yes 118325314
chr1 90135913 90135927 STAT1 JASPAR yes 30611999
chr1 90135913 90135927 STAT1 JASPAR yes 118325315
chr1 90135914 90135928 IRF7 JASPAR yes 30612000
chr1 90135914 90135928 IRF8 JASPAR yes 30612001
chr1 90135914 90135928 IRF7 JASPAR yes 118325316
chr1 90135914 90135928 IRF8 JASPAR yes 118325317
chr1 90135914 90135929 IRF9 JASPAR yes 30612002
chr1 90135914 90135929 IRF9 JASPAR yes 118325318
chr1 90135918 90135933 PRDM1 JASPAR yes 30612003
chr1 90135918 90135933 PRDM1 JASPAR yes 118325319
chr1 90135919 90135923 YY1 TRANSFAC yes 30612004
chr1 90135919 90135923 YY1 TRANSFAC yes 118325320
chr1 90135954 90135965 GCM1 JASPAR yes 30612005
chr1 90135954 90135965 GCM1 JASPAR yes 118325321
chr1 90135955 90135965 GCM2 JASPAR yes 30612006
chr1 90135955 90135965 GCM2 JASPAR yes 118325322
chr1 90135960 90135974 JUN JASPAR yes 30612007
chr1 90135960 90135974 JUN JASPAR yes 118325323
chr1 90135962 90135973 BATF JASPAR yes 30612008
chr1 90135962 90135973 BATF JASPAR yes 118325324
chr1 90135963 90135974 FOSL2 JASPAR yes 30612009
chr1 90135963 90135974 JUNB JASPAR yes 30612010
chr1 90135963 90135974 NFE2L2 JASPAR yes 30612011
chr1 90135963 90135974 FOSL2 JASPAR yes 118325325
chr1 90135963 90135974 JUNB JASPAR yes 118325326
chr1 90135963 90135974 NFE2L2 JASPAR yes 118325327
chr1 90135964 90135975 FOS JASPAR yes 30612012
chr1 90135964 90135975 FOSL1 JASPAR yes 30612013
chr1 90135964 90135975 JUND JASPAR yes 30612014
chr1 90135964 90135975 NFE2 JASPAR yes 30612015
chr1 90135964 90135975 FOS JASPAR yes 118325328
chr1 90135964 90135975 FOSL1 JASPAR yes 118325329
chr1 90135964 90135975 JUND JASPAR yes 118325330
chr1 90135964 90135975 NFE2 JASPAR yes 118325331
chr1 90135965 90135974 JDP2 JASPAR yes 30612016
chr1 90135965 90135974 JDP2 JASPAR yes 118325332
chr1 90135965 90135976 FOSL2 JASPAR yes 30612017
chr1 90135965 90135976 JUNB JASPAR yes 30612018
chr1 90135965 90135976 FOSL2 JASPAR yes 118325333
chr1 90135965 90135976 JUNB JASPAR yes 118325334
chr1 90135965 90135979 JUN JASPAR yes 30612019
chr1 90135965 90135979 JUN JASPAR yes 118325335
chr1 90135966 90135977 BATF JASPAR yes 30612020
chr1 90135966 90135977 BATF JASPAR yes 118325336
chr1 90135986 90135990 YY1 TRANSFAC yes 30612021
chr1 90135986 90135990 YY1 TRANSFAC yes 118325337
chr1 90136000 90136016 RFX2 JASPAR yes 30612022
chr1 90136000 90136016 RFX4 JASPAR yes 30612023
chr1 90136000 90136016 RFX2 JASPAR yes 118325338
chr1 90136000 90136016 RFX4 JASPAR yes 118325339
chr1 90136004 90136019 HSF1 JASPAR yes 30612024
chr1 90136004 90136019 HSF1 JASPAR yes 118325340
chr1 90136009 90136019 HMBOX1 JASPAR yes 30612025
chr1 90136009 90136019 HMBOX1 JASPAR yes 118325341
chr1 90136011 90136014 MYB TRANSFAC yes 30612026
chr1 90136011 90136014 MYB TRANSFAC yes 118325342
chr1 90136025 90136037 TAL1 JASPAR yes 30612027
chr1 90136025 90136037 TAL1 JASPAR yes 118325343
chr1 90136026 90136038 BHLHE23 JASPAR yes 30612028
chr1 90136026 90136038 BHLHE23 JASPAR yes 118325344
chr1 90136027 90136037 BHLHE22 JASPAR yes 30612029
chr1 90136027 90136037 NEUROD2 JASPAR yes 30612030
chr1 90136027 90136037 NEUROG2 JASPAR yes 30612031
chr1 90136027 90136037 OLIG1 JASPAR yes 30612032
chr1 90136027 90136037 OLIG2 JASPAR yes 30612033
chr1 90136027 90136037 OLIG3 JASPAR yes 30612034
chr1 90136027 90136037 BHLHE22 JASPAR yes 118325345
chr1 90136027 90136037 NEUROD2 JASPAR yes 118325346
chr1 90136027 90136037 NEUROG2 JASPAR yes 118325347
chr1 90136027 90136037 OLIG1 JASPAR yes 118325348
chr1 90136027 90136037 OLIG2 JASPAR yes 118325349
chr1 90136027 90136037 OLIG3 JASPAR yes 118325350
chr1 90136027 90136039 TAL1 JASPAR yes 30612035
chr1 90136027 90136039 TAL1 JASPAR yes 118325351
chr1 90136052 90136056 TEAD2 TRANSFAC yes 30612036
chr1 90136052 90136056 TEAD2 TRANSFAC yes 118325352
SNP sites on vista2386[chr1:90135818-90136060]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90135818 rs17130849 A G
EP300 SMAD2 SPI1 SREBF1
470427
chr1 90135856 rs116421997 G A,T
EP300 SPI1
470428
chr1 90135952 rs61030833 G A
BATF EP300 SPI1
470429
chr1 90136018 rs374794176 C G
BATF EP300 HMBOX1 HSF1
470430
Genes possibly regulated by vista2386[chr1:90135818-90136060]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90098631 90235462 + LRRC8C ENSG00000171488.10 90098631 0.84 0.99 882 62813
chr1 90098699 90398809 + RP11-302M6.4 ENSG00000271949.1 90098699 1.0 1.0 883 62881
Expression level of Genes
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miRNAs possibly regulated by vista2386[chr1:90135818-90136060]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results