EnhancerDB
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  3. rs17130849[chr1:90135818]
Enhancers that have rs17130849[chr1:90135818]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90133085 90141139 enh480
Prostate (PC-3) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Spleen Blood (T-cell) Stomach
chr1 90135818 90136060 vista2386
VISTA
Transcript factors that have rs17130849[chr1:90135818]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90135634 90136294 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21325501
chr1 90135634 90136294 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813632
chr1 90135639 90136159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813633
chr1 90135661 90136041 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813634
chr1 90135676 90136090 ZNF143 GTRD no Epithelial (MCF-7) 107813635
chr1 90135687 90136007 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813636
chr1 90135691 90136061 EP300 UCSC Txn Factor no Conserved 107813637
chr1 90135692 90136012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813638
chr1 90135698 90136062 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813639
chr1 90135712 90136232 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813640
chr1 90135713 90136043 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813641
chr1 90135714 90136024 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813642
chr1 90135727 90136111 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813643
chr1 90135730 90135974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813644
chr1 90135731 90136167 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813645
chr1 90135743 90136023 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813646
chr1 90135745 90136007 SPI1 UCSC Txn Factor no Conserved 107813647
chr1 90135745 90136007 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813648
chr1 90135756 90136036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813649
chr1 90135759 90136115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813650
chr1 90135786 90136076 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813651
chr1 90135808 90136218 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813652
chr1 90135814 90135824 SREBF1 JASPAR yes 30611966
chr1 90135814 90135824 SREBF1 JASPAR yes 118325282
chr1 90135817 90135830 SMAD2 JASPAR yes 30611967
chr1 90135817 90135830 SMAD2 JASPAR yes 118325283
Genes associated with rs17130849[chr1:90135818], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More