EnhancerDB
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  3. vista2408[chr1:90376424-90376756]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2408[chr1:90376424-90376756]
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Tissue distribution of vista2408
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Transcription factor that possibly regulate vista2408[chr1:90376424-90376756]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90376358 90377037 EP300 UCSC Txn Factor no Conserved 107813882
chr1 90376431 90377105 TCF12 UCSC Txn Factor no Conserved 107813892
chr1 90376443 90376458 STAT1 JASPAR yes 30633497
chr1 90376443 90376458 STAT1 JASPAR yes 118326464
chr1 90376445 90376456 STAT1 JASPAR yes 30633498
chr1 90376445 90376456 STAT1 JASPAR yes 118326465
chr1 90376473 90376494 ZNF263 JASPAR yes 30633499
chr1 90376473 90376494 ZNF263 JASPAR yes 118326466
chr1 90376476 90376497 ZNF263 JASPAR yes 30633500
chr1 90376476 90376497 ZNF263 JASPAR yes 118326467
chr1 90376495 90376501 SOX10 JASPAR yes 30633501
chr1 90376495 90376501 SOX10 JASPAR yes 118326468
chr1 90376514 90376518 ESR1 TRANSFAC yes 30633502
chr1 90376514 90376518 ESR1 TRANSFAC yes 118326469
chr1 90376518 90376523 ETS2 TRANSFAC yes 30633503
chr1 90376518 90376523 ETS2 TRANSFAC yes 118326470
chr1 90376518 90376526 FEV JASPAR yes 30633504
chr1 90376518 90376526 FEV JASPAR yes 118326471
chr1 90376540 90376554 RORA JASPAR yes 30633505
chr1 90376540 90376554 RORA JASPAR yes 118326472
chr1 90376546 90376564 ESR1 JASPAR yes 30633506
chr1 90376546 90376564 ESR1 JASPAR yes 118326473
chr1 90376547 90376562 ESR2 JASPAR yes 30633507
chr1 90376547 90376562 ESR2 JASPAR yes 118326474
chr1 90376548 90376552 ESR1 TRANSFAC yes 30633508
chr1 90376548 90376552 ESR1 TRANSFAC yes 118326475
chr1 90376567 90376573 HiNF-A TRANSFAC yes 30633509
chr1 90376567 90376573 HiNF-A TRANSFAC yes 118326476
chr1 90376569 90376581 POU3F1 JASPAR yes 30633510
chr1 90376569 90376581 POU3F2 JASPAR yes 30633511
chr1 90376569 90376581 POU3F1 JASPAR yes 118326477
chr1 90376569 90376581 POU3F2 JASPAR yes 118326478
chr1 90376579 90376583 YY1 TRANSFAC yes 30633512
chr1 90376579 90376583 YY1 TRANSFAC yes 118326479
chr1 90376584 90376597 EOMES JASPAR yes 30633513
chr1 90376584 90376597 EOMES JASPAR yes 118326480
chr1 90376585 90376596 E2F6 JASPAR yes 30633514
chr1 90376585 90376596 E2F6 JASPAR yes 118326481
chr1 90376585 90376599 E2F7 JASPAR yes 30633515
chr1 90376585 90376599 E2F7 JASPAR yes 118326482
chr1 90376586 90376597 TBX20 JASPAR yes 30633516
chr1 90376586 90376597 TBX20 JASPAR yes 118326483
chr1 90376587 90376597 TBX21 JASPAR yes 30633517
chr1 90376587 90376597 TBX21 JASPAR yes 118326484
chr1 90376588 90376596 TBX15 JASPAR yes 30633518
chr1 90376588 90376596 TBX15 JASPAR yes 118326485
chr1 90376602 90376620 ESR2 JASPAR yes 30633519
chr1 90376602 90376620 ESR2 JASPAR yes 118326486
chr1 90376603 90376618 ESR2 JASPAR yes 30633520
chr1 90376603 90376618 ESR2 JASPAR yes 118326487
chr1 90376632 90376643 ESRRB JASPAR yes 30633521
chr1 90376632 90376643 ESRRB JASPAR yes 118326488
chr1 90376633 90376641 NR4A2 JASPAR yes 30633522
chr1 90376633 90376641 NR4A2 JASPAR yes 118326489
chr1 90376650 90376662 INSM1 JASPAR yes 30633523
chr1 90376650 90376662 INSM1 JASPAR yes 118326490
chr1 90376665 90376681 SOX4 JASPAR yes 30633524
chr1 90376665 90376681 SOX4 JASPAR yes 118326491
chr1 90376713 90376731 TP53 JASPAR yes 30633525
chr1 90376713 90376731 TP53 JASPAR yes 118326492
chr1 90376714 90376734 TP53 JASPAR yes 30633526
chr1 90376714 90376734 TP53 JASPAR yes 118326493
chr1 90376725 90376729 YY1 TRANSFAC yes 30633527
chr1 90376725 90376729 YY1 TRANSFAC yes 118326494
chr1 90376730 90376751 IRF1 JASPAR yes 30633528
chr1 90376730 90376751 IRF1 JASPAR yes 118326495
chr1 90376732 90376747 STAT2 JASPAR yes 30633529
chr1 90376732 90376747 STAT2 JASPAR yes 118326496
chr1 90376735 90376750 FOXP1 JASPAR yes 30633530
chr1 90376735 90376750 FOXP1 JASPAR yes 118326497
chr1 90376736 90376751 FOXP1 JASPAR yes 30633531
chr1 90376736 90376751 FOXP1 JASPAR yes 118326498
chr1 90376737 90376752 FOXP1 JASPAR yes 30633532
chr1 90376737 90376752 FOXP1 JASPAR yes 118326499
chr1 90376739 90376754 MEF2C JASPAR yes 30633533
chr1 90376739 90376754 MEF2C JASPAR yes 118326500
SNP sites on vista2408[chr1:90376424-90376756]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90376537 rs573514137 C T
EP300 TCF12
472255
chr1 90376736 rs553981913 GT G
EP300 FOXP1 IRF1 STAT2 TCF12
472256
chr1 90376736 rs574041675 G T
EP300 FOXP1 IRF1 STAT2 TCF12
472257
chr1 90376737 rs544677288 T G
EP300 FOXP1 IRF1 STAT2 TCF12
472258
Genes possibly regulated by vista2408[chr1:90376424-90376756]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 10149
chr1 90460671 90501090 + ZNF326 ENSG00000162664.12 90460671 0.86 0.98 885 16085
Expression level of Genes
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miRNAs possibly regulated by vista2408[chr1:90376424-90376756]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results