EnhancerDB
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  3. vista24253[chr17:25672386-25672687]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24253[chr17:25672386-25672687]
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Tissue distribution of vista24253
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Transcription factor that possibly regulate vista24253[chr17:25672386-25672687]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25672026 25672968 POLR2A UCSC Txn Factor no Conserved 108245187
chr17 25672105 25672784 TAF1 UCSC Txn Factor no Conserved 108245194
chr17 25672491 25672937 MYC UCSC Txn Factor no Conserved 108245210
chr17 25672557 25672893 YY1 UCSC Txn Factor no Conserved 108245217
chr17 25672399 25672404 ETS2 TRANSFAC yes 21211345
chr17 25672399 25672404 ETS2 TRANSFAC yes 53622293
chr17 25672407 25672417 SREBF1 JASPAR yes 21211346
chr17 25672407 25672417 SREBF1 JASPAR yes 53622294
chr17 25672421 25672426 MYB TRANSFAC yes 21211347
chr17 25672421 25672426 MYB TRANSFAC yes 53622295
chr17 25672459 25672474 MYBL2 JASPAR yes 21211348
chr17 25672459 25672474 MYBL2 JASPAR yes 53622296
chr17 25672466 25672469 MYB TRANSFAC yes 21211349
chr17 25672466 25672469 MYB TRANSFAC yes 53622297
chr17 25672469 25672490 IRF1 JASPAR yes 21211350
chr17 25672469 25672490 IRF1 JASPAR yes 53622298
chr17 25672473 25672494 IRF1 JASPAR yes 21211351
chr17 25672473 25672494 IRF1 JASPAR yes 53622299
chr17 25672476 25672490 IRF7 JASPAR yes 21211352
chr17 25672476 25672490 IRF7 JASPAR yes 53622300
chr17 25672477 25672492 PRDM1 JASPAR yes 21211353
chr17 25672477 25672492 PRDM1 JASPAR yes 53622301
chr17 25672479 25672494 FOXP1 JASPAR yes 21211354
chr17 25672479 25672494 FOXP1 JASPAR yes 53622302
chr17 25672536 25672550 SPI1 JASPAR yes 21211355
chr17 25672536 25672550 SPI1 JASPAR yes 53622303
chr17 25672596 25672609 POU2F2 JASPAR yes 21211356
chr17 25672596 25672609 POU2F2 JASPAR yes 53622304
chr17 25672596 25672610 POU1F1 JASPAR yes 21211357
chr17 25672596 25672610 POU1F1 JASPAR yes 53622305
chr17 25672597 25672609 POU3F1 JASPAR yes 21211358
chr17 25672597 25672609 POU3F2 JASPAR yes 21211359
chr17 25672597 25672609 POU3F1 JASPAR yes 53622306
chr17 25672597 25672609 POU3F2 JASPAR yes 53622307
chr17 25672598 25672610 POU2F1 JASPAR yes 21211360
chr17 25672598 25672610 POU2F1 JASPAR yes 53622308
chr17 25672599 25672608 POU3F4 JASPAR yes 21211361
chr17 25672599 25672608 POU5F1B JASPAR yes 21211362
chr17 25672599 25672608 POU3F4 JASPAR yes 53622309
chr17 25672599 25672608 POU5F1B JASPAR yes 53622310
chr17 25672600 25672608 FOXL1 JASPAR yes 21211363
chr17 25672600 25672608 FOXL1 JASPAR yes 53622311
chr17 25672613 25672629 NFYA JASPAR yes 21211364
chr17 25672613 25672629 NFYA JASPAR yes 53622312
chr17 25672616 25672631 NFYB JASPAR yes 21211365
chr17 25672616 25672631 NFYB JASPAR yes 53622313
chr17 25672618 25672623 NFY TRANSFAC yes 21211366
chr17 25672618 25672623 NFY TRANSFAC yes 53622314
chr17 25672619 25672629 HMBOX1 JASPAR yes 21211367
chr17 25672619 25672629 HMBOX1 JASPAR yes 53622315
chr17 25672621 25672640 PAX5 JASPAR yes 21211368
chr17 25672621 25672640 PAX5 JASPAR yes 53622316
chr17 25672624 25672641 PAX1 JASPAR yes 21211369
chr17 25672624 25672641 PAX1 JASPAR yes 53622317
chr17 25672626 25672639 ZBTB18 JASPAR yes 21211370
chr17 25672626 25672639 ZBTB18 JASPAR yes 53622318
chr17 25672627 25672639 PKNOX2 JASPAR yes 21211371
chr17 25672627 25672639 PKNOX2 JASPAR yes 53622319
chr17 25672628 25672638 ID4 JASPAR yes 21211372
chr17 25672628 25672638 TCF3 JASPAR yes 21211373
chr17 25672628 25672638 TCF4 JASPAR yes 21211374
chr17 25672628 25672638 ID4 JASPAR yes 53622320
chr17 25672628 25672638 TCF3 JASPAR yes 53622321
chr17 25672628 25672638 TCF4 JASPAR yes 53622322
chr17 25672630 25672639 ZEB1 JASPAR yes 21211375
chr17 25672630 25672639 ZEB1 JASPAR yes 53622323
chr17 25672630 25672640 TBX21 JASPAR yes 21211376
chr17 25672630 25672640 TBX21 JASPAR yes 53622324
chr17 25672630 25672641 TBX2 JASPAR yes 21211377
chr17 25672630 25672641 TBX2 JASPAR yes 53622325
chr17 25672630 25672643 EOMES JASPAR yes 21211378
chr17 25672630 25672643 EOMES JASPAR yes 53622326
chr17 25672631 25672639 MGA JASPAR yes 21211379
chr17 25672631 25672639 TBX15 JASPAR yes 21211380
chr17 25672631 25672639 TBX1 JASPAR yes 21211381
chr17 25672631 25672639 TBX4 JASPAR yes 21211382
chr17 25672631 25672639 TBX5 JASPAR yes 21211383
chr17 25672631 25672639 MGA JASPAR yes 53622327
chr17 25672631 25672639 TBX15 JASPAR yes 53622328
chr17 25672631 25672639 TBX1 JASPAR yes 53622329
chr17 25672631 25672639 TBX4 JASPAR yes 53622330
chr17 25672631 25672639 TBX5 JASPAR yes 53622331
chr17 25672631 25672641 TBR1 JASPAR yes 21211384
chr17 25672631 25672641 TBR1 JASPAR yes 53622332
chr17 25672635 25672643 ATF2 TRANSFAC yes 21211385
chr17 25672635 25672643 ATF2 TRANSFAC yes 53622333
chr17 25672635 25672649 MTF1 JASPAR yes 21211386
chr17 25672635 25672649 MTF1 JASPAR yes 53622334
chr17 25672636 25672641 ATF1 TRANSFAC yes 21211387
chr17 25672636 25672641 ATF1 TRANSFAC yes 53622335
chr17 25672640 25672649 POU3F4 JASPAR yes 21211388
chr17 25672640 25672649 POU5F1B JASPAR yes 21211389
chr17 25672640 25672649 POU3F4 JASPAR yes 53622336
chr17 25672640 25672649 POU5F1B JASPAR yes 53622337
chr17 25672657 25672667 MSC JASPAR yes 21211390
chr17 25672657 25672667 MSC JASPAR yes 53622338
chr17 25672665 25672671 YY1 JASPAR yes 21211391
chr17 25672665 25672671 YY1 JASPAR yes 53622339
chr17 25672670 25672680 SP1 TRANSFAC yes 21211392
chr17 25672670 25672680 SP1 TRANSFAC yes 53622340
chr17 25672679 25672695 POU4F2 JASPAR yes 21211393
chr17 25672679 25672695 POU4F3 JASPAR yes 21211394
chr17 25672679 25672695 POU4F2 JASPAR yes 53622341
chr17 25672679 25672695 POU4F3 JASPAR yes 53622342
chr17 25672681 25672695 POU4F1 JASPAR yes 21211395
chr17 25672681 25672695 POU4F1 JASPAR yes 53622343
chr17 25672682 25672691 CDX1 JASPAR yes 21211396
chr17 25672682 25672691 CDX1 JASPAR yes 53622344
chr17 25672686 25672698 POU2F1 JASPAR yes 21211397
chr17 25672686 25672698 POU2F1 JASPAR yes 53622345
SNP sites on vista24253[chr17:25672386-25672687]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25672446 rs75699723 G A
POLR2A TAF1
4807073
chr17 25672517 rs77619093 A G
MYC POLR2A TAF1
4807074
chr17 25672526 rs60849750 C A
MYC POLR2A TAF1
4807075
chr17 25672531 rs182733709 G A
MYC POLR2A TAF1
4807076
chr17 25672563 rs7222671 C T
MYC POLR2A TAF1 YY1
4807077
chr17 25672578 rs115564988 G A,C
MYC POLR2A TAF1 YY1
4807078
chr17 25672611 rs73984478 G T
MYC POLR2A TAF1 YY1
4807079
chr17 25672640 rs116506592 C T
ATF1 ATF2 EOMES MTF1 MYC PAX1 PAX5 POLR2A POU3F4 POU5F1B TAF1 TBR1 TBX2 TBX21 YY1
4807080
chr17 25672665 rs73984479 G A
MSC MYC POLR2A TAF1 YY1
4807081
Genes possibly regulated by vista24253[chr17:25672386-25672687]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25621102 25640657 + WSB1 ENSG00000109046.10 25621102 0.8 1.0 15553 48716
Expression level of Genes
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miRNAs possibly regulated by vista24253[chr17:25672386-25672687]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results