EnhancerDB
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  3. rs116506592[chr17:25672640]
Enhancers that have rs116506592[chr17:25672640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr17 25672386 25672687 vista24253
VISTA
Transcript factors that have rs116506592[chr17:25672640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25672026 25672968 POLR2A UCSC Txn Factor no Conserved 108245187
chr17 25672045 25672749 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245188
chr17 25672082 25672752 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245190
chr17 25672105 25672683 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245193
chr17 25672105 25672784 TAF1 UCSC Txn Factor no Conserved 108245194
chr17 25672112 25672728 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245195
chr17 25672246 25672762 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747635
chr17 25672246 25672762 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245200
chr17 25672339 25672715 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245202
chr17 25672365 25672945 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245203
chr17 25672369 25672674 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747637
chr17 25672369 25672674 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245204
chr17 25672384 25672784 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747638
chr17 25672384 25672784 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245205
chr17 25672392 25672968 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747639
chr17 25672392 25672968 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245206
chr17 25672470 25672662 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747641
chr17 25672470 25672662 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245208
chr17 25672474 25672867 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747642
chr17 25672474 25672867 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245209
chr17 25672491 25672937 MYC UCSC Txn Factor no Conserved 108245210
chr17 25672500 25672864 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747643
chr17 25672500 25672864 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245211
chr17 25672503 25672759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747644
chr17 25672503 25672759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245212
chr17 25672504 25672864 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747645
chr17 25672504 25672864 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245213
chr17 25672548 25672878 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245214
chr17 25672552 25672768 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245215
chr17 25672553 25672917 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747646
chr17 25672553 25672917 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245216
chr17 25672557 25672893 YY1 UCSC Txn Factor no Conserved 108245217
chr17 25672563 25672867 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245218
chr17 25672594 25672872 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245219
chr17 25672617 25672779 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747647
chr17 25672617 25672779 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245220
chr17 25672621 25672640 PAX5 JASPAR yes 21211368
chr17 25672621 25672640 PAX5 JASPAR yes 53622316
chr17 25672624 25672641 PAX1 JASPAR yes 21211369
chr17 25672624 25672641 PAX1 JASPAR yes 53622317
chr17 25672630 25672640 TBX21 JASPAR yes 21211376
chr17 25672630 25672640 TBX21 JASPAR yes 53622324
chr17 25672630 25672641 TBX2 JASPAR yes 21211377
chr17 25672630 25672641 TBX2 JASPAR yes 53622325
chr17 25672630 25672643 EOMES JASPAR yes 21211378
chr17 25672630 25672643 EOMES JASPAR yes 53622326
chr17 25672631 25672641 TBR1 JASPAR yes 21211384
chr17 25672631 25672641 TBR1 JASPAR yes 53622332
chr17 25672635 25672643 ATF2 TRANSFAC yes 21211385
chr17 25672635 25672643 ATF2 TRANSFAC yes 53622333
chr17 25672635 25672649 MTF1 JASPAR yes 21211386
chr17 25672635 25672649 MTF1 JASPAR yes 53622334
chr17 25672636 25672641 ATF1 TRANSFAC yes 21211387
chr17 25672636 25672641 ATF1 TRANSFAC yes 53622335
chr17 25672640 25672649 POU3F4 JASPAR yes 21211388
chr17 25672640 25672649 POU5F1B JASPAR yes 21211389
chr17 25672640 25672649 POU3F4 JASPAR yes 53622336
chr17 25672640 25672649 POU5F1B JASPAR yes 53622337
Genes associated with rs116506592[chr17:25672640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More