EnhancerDB
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  3. vista24255[chr17:25680204-25680481]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24255[chr17:25680204-25680481]
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Tissue distribution of vista24255
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Transcription factor that possibly regulate vista24255[chr17:25680204-25680481]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245255
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245256
chr17 25680201 25680215 GLIS2 JASPAR yes 21211429
chr17 25680201 25680215 GLIS3 JASPAR yes 21211430
chr17 25680201 25680215 GLIS2 JASPAR yes 53623488
chr17 25680201 25680215 GLIS3 JASPAR yes 53623489
chr17 25680201 25680216 ZIC3 JASPAR yes 21211431
chr17 25680201 25680216 ZIC4 JASPAR yes 21211432
chr17 25680201 25680216 ZIC3 JASPAR yes 53623490
chr17 25680201 25680216 ZIC4 JASPAR yes 53623491
chr17 25680217 25680233 POU4F2 JASPAR yes 21211433
chr17 25680217 25680233 POU4F3 JASPAR yes 21211434
chr17 25680217 25680233 POU4F2 JASPAR yes 53623492
chr17 25680217 25680233 POU4F3 JASPAR yes 53623493
chr17 25680219 25680233 POU4F1 JASPAR yes 21211435
chr17 25680219 25680233 POU4F1 JASPAR yes 53623494
chr17 25680224 25680236 POU2F1 JASPAR yes 21211436
chr17 25680224 25680236 POU2F1 JASPAR yes 53623495
chr17 25680224 25680237 POU3F3 JASPAR yes 21211437
chr17 25680224 25680237 POU3F3 JASPAR yes 53623496
chr17 25680224 25680238 POU1F1 JASPAR yes 21211438
chr17 25680224 25680238 POU1F1 JASPAR yes 53623497
chr17 25680225 25680237 POU3F1 JASPAR yes 21211439
chr17 25680225 25680237 POU3F2 JASPAR yes 21211440
chr17 25680225 25680237 POU3F1 JASPAR yes 53623498
chr17 25680225 25680237 POU3F2 JASPAR yes 53623499
chr17 25680225 25680238 POU2F2 JASPAR yes 21211441
chr17 25680225 25680238 POU2F2 JASPAR yes 53623500
chr17 25680226 25680235 POU3F4 JASPAR yes 21211442
chr17 25680226 25680235 POU5F1B JASPAR yes 21211443
chr17 25680226 25680235 POU3F4 JASPAR yes 53623501
chr17 25680226 25680235 POU5F1B JASPAR yes 53623502
chr17 25680227 25680234 POU2F1 TRANSFAC yes 21211444
chr17 25680227 25680234 POU2F2 TRANSFAC yes 21211445
chr17 25680227 25680234 POU2F1 TRANSFAC yes 53623503
chr17 25680227 25680234 POU2F2 TRANSFAC yes 53623504
chr17 25680267 25680286 REST JASPAR yes 21211446
chr17 25680267 25680286 REST JASPAR yes 53623505
chr17 25680285 25680296 E2F1 JASPAR yes 21211447
chr17 25680285 25680296 E2F1 JASPAR yes 53623506
chr17 25680286 25680291 SP1 TRANSFAC yes 21211448
chr17 25680286 25680291 SP1 TRANSFAC yes 53623507
chr17 25680286 25680297 E2F4 JASPAR yes 21211449
chr17 25680286 25680297 E2F6 JASPAR yes 21211450
chr17 25680286 25680297 E2F4 JASPAR yes 53623508
chr17 25680286 25680297 E2F6 JASPAR yes 53623509
chr17 25680287 25680292 SP1 TRANSFAC yes 21211451
chr17 25680287 25680292 SP1 TRANSFAC yes 53623510
chr17 25680328 25680332 LFA1 TRANSFAC yes 21211452
chr17 25680328 25680332 LFA1 TRANSFAC yes 53623511
chr17 25680350 25680361 HOXA10 JASPAR yes 21211453
chr17 25680350 25680361 HOXA10 JASPAR yes 53623512
chr17 25680351 25680361 HOXB13 JASPAR yes 21211454
chr17 25680351 25680361 HOXD13 JASPAR yes 21211455
chr17 25680351 25680361 HOXB13 JASPAR yes 53623513
chr17 25680351 25680361 HOXD13 JASPAR yes 53623514
chr17 25680355 25680361 TBP TRANSFAC yes 21211456
chr17 25680355 25680361 TBP TRANSFAC yes 53623515
chr17 25680362 25680367 GATA2 JASPAR yes 21211457
chr17 25680362 25680367 GATA2 JASPAR yes 53623516
chr17 25680370 25680376 TBP TRANSFAC yes 21211458
chr17 25680370 25680376 TBP TRANSFAC yes 53623517
chr17 25680373 25680385 POU2F1 JASPAR yes 21211459
chr17 25680373 25680385 POU2F1 JASPAR yes 53623518
chr17 25680373 25680386 POU3F3 JASPAR yes 21211460
chr17 25680373 25680386 POU3F3 JASPAR yes 53623519
chr17 25680373 25680387 POU1F1 JASPAR yes 21211461
chr17 25680373 25680387 POU1F1 JASPAR yes 53623520
chr17 25680374 25680386 POU3F1 JASPAR yes 21211462
chr17 25680374 25680386 POU3F2 JASPAR yes 21211463
chr17 25680374 25680386 POU3F1 JASPAR yes 53623521
chr17 25680374 25680386 POU3F2 JASPAR yes 53623522
chr17 25680374 25680387 POU2F2 JASPAR yes 21211464
chr17 25680374 25680387 POU2F2 JASPAR yes 53623523
chr17 25680375 25680384 POU3F4 JASPAR yes 21211465
chr17 25680375 25680384 POU5F1B JASPAR yes 21211466
chr17 25680375 25680384 POU3F4 JASPAR yes 53623524
chr17 25680375 25680384 POU5F1B JASPAR yes 53623525
chr17 25680376 25680383 POU2F1 TRANSFAC yes 21211467
chr17 25680376 25680383 POU2F2 TRANSFAC yes 21211468
chr17 25680376 25680383 POU2F1 TRANSFAC yes 53623526
chr17 25680376 25680383 POU2F2 TRANSFAC yes 53623527
chr17 25680402 25680423 MAFG JASPAR yes 21211469
chr17 25680402 25680423 MAFG JASPAR yes 53623528
chr17 25680406 25680417 NFE2L2 JASPAR yes 21211470
chr17 25680406 25680417 NFE2L2 JASPAR yes 53623529
chr17 25680409 25680415 JUN TRANSFAC yes 21211471
chr17 25680409 25680415 JUN TRANSFAC yes 53623530
chr17 25680426 25680431 SP1 TRANSFAC yes 21211472
chr17 25680426 25680431 SP1 TRANSFAC yes 53623531
chr17 25680429 25680434 SP1 TRANSFAC yes 21211473
chr17 25680429 25680434 SP1 TRANSFAC yes 53623532
chr17 25680429 25680436 SP1 TRANSFAC yes 21211474
chr17 25680429 25680436 SP1 TRANSFAC yes 53623533
chr17 25680429 25680439 SP1 JASPAR yes 21211475
chr17 25680429 25680439 SP1 JASPAR yes 53623534
chr17 25680437 25680448 SPDEF JASPAR yes 21211476
chr17 25680437 25680448 SPDEF JASPAR yes 53623535
chr17 25680450 25680453 MYB TRANSFAC yes 21211477
chr17 25680450 25680453 MYB TRANSFAC yes 53623536
chr17 25680454 25680460 NFE2 TRANSFAC yes 21211478
chr17 25680454 25680460 NFE2 TRANSFAC yes 53623537
chr17 25680456 25680465 TFAP2A JASPAR yes 21211479
chr17 25680456 25680465 TFAP2A JASPAR yes 53623538
chr17 25680462 25680470 RHOXF1 JASPAR yes 21211480
chr17 25680462 25680470 RHOXF1 JASPAR yes 53623539
chr17 25680462 25680471 PITX3 JASPAR yes 21211481
chr17 25680462 25680471 PITX3 JASPAR yes 53623540
SNP sites on vista24255[chr17:25680204-25680481]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25680248 rs548216433 C G
POLR2A
4807156
chr17 25680425 rs113950180 G A,C,T
POLR2A
4807157
chr17 25680456 rs9895042 T A
NFE2 POLR2A TFAP2A
4807158
chr17 25680465 rs116096298 G T
PITX3 POLR2A RHOXF1 TFAP2A
4807159
Genes possibly regulated by vista24255[chr17:25680204-25680481]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25621102 25640657 + WSB1 ENSG00000109046.10 25621102 0.8 1.0 15553 40898
Expression level of Genes
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miRNAs possibly regulated by vista24255[chr17:25680204-25680481]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results