EnhancerDB
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  3. rs116096298[chr17:25680465]
Enhancers that have rs116096298[chr17:25680465]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr17 25680204 25680481 vista24255
VISTA
Transcript factors that have rs116096298[chr17:25680465]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245255
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245256
chr17 25680178 25680682 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747665
chr17 25680178 25680682 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245259
chr17 25680178 25680682 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245260
chr17 25680395 25681051 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21747666
chr17 25680395 25681051 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108245261
chr17 25680395 25681051 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108245262
chr17 25680399 25680903 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747667
chr17 25680399 25680903 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245263
chr17 25680399 25680903 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245264
chr17 25680415 25681099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245265
chr17 25680415 25681099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245266
chr17 25680456 25680465 TFAP2A JASPAR yes 21211479
chr17 25680456 25680465 TFAP2A JASPAR yes 53623538
chr17 25680461 25681037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747668
chr17 25680461 25681037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245267
chr17 25680461 25681037 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245268
chr17 25680462 25680470 RHOXF1 JASPAR yes 21211480
chr17 25680462 25680470 RHOXF1 JASPAR yes 53623539
chr17 25680462 25680471 PITX3 JASPAR yes 21211481
chr17 25680462 25680471 PITX3 JASPAR yes 53623540
Genes associated with rs116096298[chr17:25680465], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More