EnhancerDB
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  3. vista24272[chr17:25858301-25858609]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24272[chr17:25858301-25858609]
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Tissue distribution of vista24272
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Transcription factor that possibly regulate vista24272[chr17:25858301-25858609]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25858000 25858316 EBF1 UCSC Txn Factor no Conserved 108245726
chr17 25858000 25858316 EBF1 UCSC Txn Factor no Conserved 108245727
chr17 25858295 25858310 HNF4G JASPAR yes 21212186
chr17 25858295 25858310 HNF4G JASPAR yes 53641913
chr17 25858296 25858311 HNF4A JASPAR yes 21212187
chr17 25858296 25858311 HNF4A JASPAR yes 53641914
chr17 25858308 25858328 TP63 JASPAR yes 21212188
chr17 25858308 25858328 TP63 JASPAR yes 53641915
chr17 25858313 25858324 NFE2L2 JASPAR yes 21212189
chr17 25858313 25858324 NFE2L2 JASPAR yes 53641916
chr17 25858316 25858322 ESR1 TRANSFAC yes 21212190
chr17 25858316 25858322 ESR1 TRANSFAC yes 53641917
chr17 25858318 25858322 ESR1 TRANSFAC yes 21212191
chr17 25858318 25858322 ESR1 TRANSFAC yes 53641918
chr17 25858318 25858339 REST JASPAR yes 21212192
chr17 25858318 25858339 REST JASPAR yes 53641919
chr17 25858321 25858332 ESRRB JASPAR yes 21212193
chr17 25858321 25858332 ESRRB JASPAR yes 53641920
chr17 25858322 25858337 HNF4A JASPAR yes 21212194
chr17 25858322 25858337 HNF4A JASPAR yes 53641921
chr17 25858326 25858336 NFIA JASPAR yes 21212195
chr17 25858326 25858336 NFIA JASPAR yes 53641922
chr17 25858327 25858336 NFIX JASPAR yes 21212196
chr17 25858327 25858336 NFIX JASPAR yes 53641923
chr17 25858328 25858334 NFIC JASPAR yes 21212197
chr17 25858328 25858334 NFIC JASPAR yes 53641924
chr17 25858331 25858346 ZIC3 JASPAR yes 21212198
chr17 25858331 25858346 ZIC4 JASPAR yes 21212199
chr17 25858331 25858346 ZIC3 JASPAR yes 53641925
chr17 25858331 25858346 ZIC4 JASPAR yes 53641926
chr17 25858332 25858346 ZIC1 JASPAR yes 21212200
chr17 25858332 25858346 ZIC1 JASPAR yes 53641927
chr17 25858338 25858344 SP1 TRANSFAC yes 21212201
chr17 25858338 25858344 SP1 TRANSFAC yes 53641928
chr17 25858339 25858344 SP1 TRANSFAC yes 21212202
chr17 25858339 25858344 SP1 TRANSFAC yes 53641929
chr17 25858345 25858359 PLAG1 JASPAR yes 21212203
chr17 25858345 25858359 PLAG1 JASPAR yes 53641930
chr17 25858368 25858385 RXRA JASPAR yes 21212204
chr17 25858368 25858385 RXRA JASPAR yes 53641931
chr17 25858376 25858397 ZNF263 JASPAR yes 21212205
chr17 25858376 25858397 ZNF263 JASPAR yes 53641932
chr17 25858384 25858401 RARA JASPAR yes 21212206
chr17 25858384 25858401 RXRA JASPAR yes 21212207
chr17 25858384 25858401 RARA JASPAR yes 53641933
chr17 25858384 25858401 RXRA JASPAR yes 53641934
chr17 25858449 25858459 ZNF740 JASPAR yes 21212208
chr17 25858449 25858459 ZNF740 JASPAR yes 53641935
chr17 25858451 25858469 ESR1 JASPAR yes 21212209
chr17 25858451 25858469 ESR1 JASPAR yes 53641936
chr17 25858463 25858467 ESR1 TRANSFAC yes 21212210
chr17 25858463 25858467 ESR1 TRANSFAC yes 53641937
chr17 25858463 25858473 MAX JASPAR yes 21212211
chr17 25858463 25858473 MAX JASPAR yes 53641938
chr17 25858463 25858474 USF1 JASPAR yes 21212212
chr17 25858463 25858474 USF2 JASPAR yes 21212213
chr17 25858463 25858474 USF1 JASPAR yes 53641939
chr17 25858463 25858474 USF2 JASPAR yes 53641940
chr17 25858463 25858478 SCRT1 JASPAR yes 21212214
chr17 25858463 25858478 SCRT1 JASPAR yes 53641941
chr17 25858464 25858474 TFEB JASPAR yes 21212215
chr17 25858464 25858474 TFEB JASPAR yes 53641942
chr17 25858474 25858493 REST JASPAR yes 21212216
chr17 25858474 25858493 REST JASPAR yes 53641943
chr17 25858479 25858490 EBF1 JASPAR yes 21212217
chr17 25858479 25858490 EBF1 JASPAR yes 53641944
chr17 25858479 25858494 ZIC3 JASPAR yes 21212218
chr17 25858479 25858494 ZIC3 JASPAR yes 53641945
chr17 25858480 25858494 GLIS2 JASPAR yes 21212219
chr17 25858480 25858494 GLIS2 JASPAR yes 53641946
chr17 25858506 25858518 YY1 JASPAR yes 21212220
chr17 25858506 25858518 YY1 JASPAR yes 53641947
chr17 25858511 25858515 YY1 TRANSFAC yes 21212221
chr17 25858511 25858515 YY1 TRANSFAC yes 53641948
chr17 25858523 25858527 H4TF2 TRANSFAC yes 21212222
chr17 25858523 25858527 H4TF2 TRANSFAC yes 53641949
chr17 25858566 25858578 ZBTB7A JASPAR yes 21212223
chr17 25858566 25858578 ZBTB7A JASPAR yes 53641950
chr17 25858568 25858588 RREB1 JASPAR yes 21212224
chr17 25858568 25858588 RREB1 JASPAR yes 53641951
chr17 25858575 25858589 PLAG1 JASPAR yes 21212225
chr17 25858575 25858589 PLAG1 JASPAR yes 53641952
chr17 25858578 25858590 INSM1 JASPAR yes 21212226
chr17 25858578 25858590 INSM1 JASPAR yes 53641953
chr17 25858584 25858597 NFKB1 JASPAR yes 21212227
chr17 25858584 25858597 NFKB2 JASPAR yes 21212228
chr17 25858584 25858597 NFKB1 JASPAR yes 53641954
chr17 25858584 25858597 NFKB2 JASPAR yes 53641955
chr17 25858589 25858603 ZIC1 JASPAR yes 21212229
chr17 25858589 25858603 ZIC1 JASPAR yes 53641956
chr17 25858589 25858604 ZIC3 JASPAR yes 21212230
chr17 25858589 25858604 ZIC3 JASPAR yes 53641957
chr17 25858592 25858598 SP1 TRANSFAC yes 21212231
chr17 25858592 25858598 SP1 TRANSFAC yes 53641958
chr17 25858592 25858607 ZIC3 JASPAR yes 21212232
chr17 25858592 25858607 ZIC3 JASPAR yes 53641959
SNP sites on vista24272[chr17:25858301-25858609]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25858428 rs73983459 C A no 4808673
chr17 25858449 rs189049761 T C
ZNF740
4808674
chr17 25858517 rs76449479 T C
YY1
4808675
chr17 25858581 rs10719252 CT C
INSM1 PLAG1 RREB1
4808676
chr17 25858606 rs183489393 G T
ZIC3
4808677
Genes possibly regulated by vista24272[chr17:25858301-25858609]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25783670 25953461 + KSR1 ENSG00000141068.9 25783670 0.82 0.99 15554 25369
chr17 25950390 25967803 + AC015688.3 ENSG00000266728.1 25950390 0.96 0.88 15555 8219
chr17 25956824 25976586 + LGALS9 ENSG00000168961.12 25956824 0.83 1.0 15556 1785
Expression level of Genes
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miRNAs possibly regulated by vista24272[chr17:25858301-25858609]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results