EnhancerDB
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  3. rs183489393[chr17:25858606]
Enhancers that have rs183489393[chr17:25858606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
chr17 25858301 25858609 vista24272
VISTA
Transcript factors that have rs183489393[chr17:25858606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25858353 25858617 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21748152
chr17 25858353 25858617 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245732
chr17 25858592 25858607 ZIC3 JASPAR yes 21212232
chr17 25858592 25858607 ZIC3 JASPAR yes 53641959
Genes associated with rs183489393[chr17:25858606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More