EnhancerDB
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  3. vista24273[chr17:25858732-25858982]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24273[chr17:25858732-25858982]
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Tissue distribution of vista24273
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Transcription factor that possibly regulate vista24273[chr17:25858732-25858982]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25858727 25858745 ESR1 JASPAR yes 21212233
chr17 25858727 25858745 ESR1 JASPAR yes 53641969
chr17 25858729 25858744 HNF4G JASPAR yes 21212234
chr17 25858729 25858744 HNF4G JASPAR yes 53641970
chr17 25858730 25858745 HNF4A JASPAR yes 21212235
chr17 25858730 25858745 HNF4A JASPAR yes 53641971
chr17 25858733 25858753 ESR1 JASPAR yes 21212236
chr17 25858733 25858753 ESR1 JASPAR yes 53641972
chr17 25858734 25858740 SOX10 JASPAR yes 21212237
chr17 25858734 25858740 SOX10 JASPAR yes 53641973
chr17 25858779 25858782 MYB TRANSFAC yes 21212238
chr17 25858779 25858782 MYB TRANSFAC yes 53641974
chr17 25858783 25858797 NR2F1 JASPAR yes 21212239
chr17 25858783 25858797 NR2F1 JASPAR yes 53641975
chr17 25858794 25858809 NR2C2 JASPAR yes 21212240
chr17 25858794 25858809 NR2C2 JASPAR yes 53641976
chr17 25858797 25858818 REST JASPAR yes 21212241
chr17 25858797 25858818 REST JASPAR yes 53641977
chr17 25858816 25858837 IRF1 JASPAR yes 21212242
chr17 25858816 25858837 IRF1 JASPAR yes 53641978
chr17 25858817 25858825 GATA3 JASPAR yes 21212243
chr17 25858817 25858825 GATA3 JASPAR yes 53641979
chr17 25858823 25858838 LEF1 JASPAR yes 21212244
chr17 25858823 25858838 LEF1 JASPAR yes 53641980
chr17 25858824 25858838 TCF7L2 JASPAR yes 21212245
chr17 25858824 25858838 TCF7L2 JASPAR yes 53641981
chr17 25858833 25858852 CTCF JASPAR yes 21212246
chr17 25858833 25858852 CTCF JASPAR yes 53641982
chr17 25858841 25858846 TFAP2A TRANSFAC yes 21212247
chr17 25858841 25858846 TFAP2A TRANSFAC yes 53641983
chr17 25858841 25858847 MZF1 JASPAR yes 21212248
chr17 25858841 25858847 MZF1 JASPAR yes 53641984
chr17 25858844 25858849 GATA2 JASPAR yes 21212249
chr17 25858844 25858849 GATA2 JASPAR yes 53641985
chr17 25858853 25858856 MYB TRANSFAC yes 21212250
chr17 25858853 25858856 MYB TRANSFAC yes 53641986
chr17 25858864 25858870 MZF1 JASPAR yes 21212251
chr17 25858864 25858870 MZF1 JASPAR yes 53641987
chr17 25858876 25858887 NFE2L2 JASPAR yes 21212252
chr17 25858876 25858887 NFE2L2 JASPAR yes 53641988
chr17 25858885 25858889 YY1 TRANSFAC yes 21212253
chr17 25858885 25858889 YY1 TRANSFAC yes 53641989
chr17 25858920 25858935 MEF2C JASPAR yes 21212254
chr17 25858920 25858935 MEF2C JASPAR yes 53641990
chr17 25858921 25858936 MEF2A JASPAR yes 21212255
chr17 25858921 25858936 MEF2A JASPAR yes 53641991
chr17 25858922 25858934 MEF2A JASPAR yes 21212256
chr17 25858922 25858934 MEF2B JASPAR yes 21212257
chr17 25858922 25858934 MEF2D JASPAR yes 21212258
chr17 25858922 25858934 MEF2A JASPAR yes 53641992
chr17 25858922 25858934 MEF2B JASPAR yes 53641993
chr17 25858922 25858934 MEF2D JASPAR yes 53641994
chr17 25858923 25858933 MEF2A JASPAR yes 21212259
chr17 25858923 25858933 MEF2A JASPAR yes 53641995
chr17 25858926 25858940 SPI1 JASPAR yes 21212260
chr17 25858926 25858940 SPI1 JASPAR yes 53641996
chr17 25858974 25858988 NR2F1 JASPAR yes 21212261
chr17 25858974 25858988 NR2F1 JASPAR yes 53641997
SNP sites on vista24273[chr17:25858732-25858982]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25858833 rs114364520 A G
CTCF IRF1 LEF1 TCF7L2
4808678
chr17 25858849 rs148995678 A G
CTCF GATA2
4808679
chr17 25858943 rs2002512 G A no 4808680
Genes possibly regulated by vista24273[chr17:25858732-25858982]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25783670 25953461 + KSR1 ENSG00000141068.9 25783670 0.82 0.99 15554 24938
chr17 25950390 25967803 + AC015688.3 ENSG00000266728.1 25950390 0.96 0.88 15555 8592
chr17 25956824 25976586 + LGALS9 ENSG00000168961.12 25956824 0.83 1.0 15556 2158
Expression level of Genes
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miRNAs possibly regulated by vista24273[chr17:25858732-25858982]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results