EnhancerDB
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  3. rs148995678[chr17:25858849]
Enhancers that have rs148995678[chr17:25858849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
chr17 25858732 25858982 vista24273
VISTA
Transcript factors that have rs148995678[chr17:25858849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25858833 25858852 CTCF JASPAR yes 21212246
chr17 25858833 25858852 CTCF JASPAR yes 53641982
chr17 25858844 25858849 GATA2 JASPAR yes 21212249
chr17 25858844 25858849 GATA2 JASPAR yes 53641985
Genes associated with rs148995678[chr17:25858849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More