EnhancerDB
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  3. vista243[chr1:8300045-8300389]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista243[chr1:8300045-8300389]
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Tissue distribution of vista243
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Transcription factor that possibly regulate vista243[chr1:8300045-8300389]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 8300030 8300048 NR3C1 JASPAR yes 26532589
chr1 8300030 8300048 NR3C1 JASPAR yes 118224699
chr1 8300036 8300057 IRF1 JASPAR yes 26532590
chr1 8300036 8300057 IRF1 JASPAR yes 118224700
chr1 8300037 8300058 IRF1 JASPAR yes 26532591
chr1 8300037 8300058 IRF1 JASPAR yes 118224701
chr1 8300038 8300053 FOXP1 JASPAR yes 26532592
chr1 8300038 8300053 FOXP1 JASPAR yes 118224702
chr1 8300038 8300059 IRF1 JASPAR yes 26532593
chr1 8300038 8300059 IRF1 JASPAR yes 118224703
chr1 8300039 8300054 FOXP1 JASPAR yes 26532594
chr1 8300039 8300054 FOXP1 JASPAR yes 118224704
chr1 8300039 8300060 IRF1 JASPAR yes 26532595
chr1 8300039 8300060 IRF1 JASPAR yes 118224705
chr1 8300040 8300055 FOXP1 JASPAR yes 26532596
chr1 8300040 8300055 FOXP1 JASPAR yes 118224706
chr1 8300040 8300061 IRF1 JASPAR yes 26532597
chr1 8300040 8300061 IRF1 JASPAR yes 118224707
chr1 8300041 8300056 FOXP1 JASPAR yes 26532598
chr1 8300041 8300056 FOXP1 JASPAR yes 118224708
chr1 8300042 8300057 FOXP1 JASPAR yes 26532599
chr1 8300042 8300057 FOXP1 JASPAR yes 118224709
chr1 8300043 8300058 FOXP1 JASPAR yes 26532600
chr1 8300043 8300058 FOXP1 JASPAR yes 118224710
chr1 8300044 8300059 FOXP1 JASPAR yes 26532601
chr1 8300044 8300059 FOXP1 JASPAR yes 118224711
chr1 8300045 8300060 FOXP1 JASPAR yes 26532602
chr1 8300045 8300060 FOXP1 JASPAR yes 118224712
chr1 8300046 8300061 FOXP1 JASPAR yes 26532603
chr1 8300046 8300061 FOXP1 JASPAR yes 118224713
chr1 8300047 8300062 FOXP1 JASPAR yes 26532604
chr1 8300047 8300062 FOXP1 JASPAR yes 118224714
chr1 8300050 8300065 MEF2C JASPAR yes 26532605
chr1 8300050 8300065 MEF2C JASPAR yes 118224715
chr1 8300067 8300086 PAX5 JASPAR yes 26532606
chr1 8300067 8300086 PAX5 JASPAR yes 118224716
chr1 8300075 8300079 NFE TRANSFAC yes 26532607
chr1 8300075 8300079 NFE TRANSFAC yes 118224717
chr1 8300101 8300107 YY1 JASPAR yes 26532608
chr1 8300101 8300107 YY1 JASPAR yes 118224718
chr1 8300108 8300125 ESR1 JASPAR yes 26532609
chr1 8300108 8300125 ESR1 JASPAR yes 118224719
chr1 8300155 8300174 REST JASPAR yes 26532610
chr1 8300155 8300174 REST JASPAR yes 118224720
chr1 8300165 8300177 NHLH1 JASPAR yes 26532611
chr1 8300165 8300177 NHLH1 JASPAR yes 118224721
chr1 8300166 8300176 NHLH1 JASPAR yes 26532612
chr1 8300166 8300176 NHLH1 JASPAR yes 118224722
chr1 8300178 8300187 SNAI2 JASPAR yes 26532613
chr1 8300178 8300187 SNAI2 JASPAR yes 118224723
chr1 8300178 8300188 ID4 JASPAR yes 26532614
chr1 8300178 8300188 TCF3 JASPAR yes 26532615
chr1 8300178 8300188 TCF4 JASPAR yes 26532616
chr1 8300178 8300188 ID4 JASPAR yes 118224724
chr1 8300178 8300188 TCF3 JASPAR yes 118224725
chr1 8300178 8300188 TCF4 JASPAR yes 118224726
chr1 8300180 8300189 ZEB1 JASPAR yes 26532617
chr1 8300180 8300189 ZEB1 JASPAR yes 118224727
chr1 8300210 8300225 MEF2A JASPAR yes 26532618
chr1 8300210 8300225 MEF2A JASPAR yes 118224728
chr1 8300211 8300226 MEF2C JASPAR yes 26532619
chr1 8300211 8300226 MEF2C JASPAR yes 118224729
chr1 8300214 8300218 YY1 TRANSFAC yes 26532620
chr1 8300214 8300218 YY1 TRANSFAC yes 118224730
chr1 8300264 8300277 NR2F1 JASPAR yes 26532621
chr1 8300264 8300277 NR2F1 JASPAR yes 118224731
chr1 8300279 8300291 ZBTB7A JASPAR yes 26532622
chr1 8300279 8300291 ZBTB7A JASPAR yes 118224732
chr1 8300280 8300285 SP1 TRANSFAC yes 26532623
chr1 8300280 8300285 SP1 TRANSFAC yes 118224733
chr1 8300290 8300309 REST JASPAR yes 26532624
chr1 8300290 8300309 REST JASPAR yes 118224734
chr1 8300311 8300328 PAX1 JASPAR yes 26532625
chr1 8300311 8300328 PAX9 JASPAR yes 26532626
chr1 8300311 8300328 PAX1 JASPAR yes 118224735
chr1 8300311 8300328 PAX9 JASPAR yes 118224736
chr1 8300339 8300360 ZNF263 JASPAR yes 26532627
chr1 8300339 8300360 ZNF263 JASPAR yes 118224737
chr1 8300352 8300357 ETS2 TRANSFAC yes 26532628
chr1 8300352 8300357 ETS2 TRANSFAC yes 118224738
chr1 8300353 8300364 FOXP2 JASPAR yes 26532629
chr1 8300353 8300364 FOXP2 JASPAR yes 118224739
chr1 8300354 8300362 FOXO3 JASPAR yes 26532630
chr1 8300354 8300362 FOXO3 JASPAR yes 118224740
chr1 8300357 8300369 NHLH1 JASPAR yes 26532631
chr1 8300357 8300369 NHLH1 JASPAR yes 118224741
chr1 8300357 8300370 ZBTB18 JASPAR yes 26532632
chr1 8300357 8300370 ZBTB18 JASPAR yes 118224742
chr1 8300358 8300368 MSC JASPAR yes 26532633
chr1 8300358 8300368 MYF6 JASPAR yes 26532634
chr1 8300358 8300368 NHLH1 JASPAR yes 26532635
chr1 8300358 8300368 TFAP4 JASPAR yes 26532636
chr1 8300358 8300368 MSC JASPAR yes 118224743
chr1 8300358 8300368 MYF6 JASPAR yes 118224744
chr1 8300358 8300368 NHLH1 JASPAR yes 118224745
chr1 8300358 8300368 TFAP4 JASPAR yes 118224746
chr1 8300359 8300380 REST JASPAR yes 26532637
chr1 8300359 8300380 REST JASPAR yes 118224747
chr1 8300363 8300369 NFE2 TRANSFAC yes 26532638
chr1 8300363 8300369 NFE2 TRANSFAC yes 118224748
chr1 8300364 8300378 GLIS2 JASPAR yes 26532639
chr1 8300364 8300378 ZIC1 JASPAR yes 26532640
chr1 8300364 8300378 GLIS2 JASPAR yes 118224749
chr1 8300364 8300378 ZIC1 JASPAR yes 118224750
chr1 8300364 8300379 ZIC4 JASPAR yes 26532641
chr1 8300364 8300379 ZIC4 JASPAR yes 118224751
chr1 8300367 8300377 MAX JASPAR yes 26532642
chr1 8300367 8300377 MNT JASPAR yes 26532643
chr1 8300367 8300377 MAX JASPAR yes 118224752
chr1 8300367 8300377 MNT JASPAR yes 118224753
chr1 8300368 8300375 USF1 JASPAR yes 26532644
chr1 8300368 8300375 USF1 JASPAR yes 118224754
chr1 8300368 8300378 MAX JASPAR yes 26532645
chr1 8300368 8300378 MAX JASPAR yes 118224755
chr1 8300369 8300374 MYC TRANSFAC yes 26532646
chr1 8300369 8300374 USF1 TRANSFAC yes 26532647
chr1 8300369 8300374 USF2 TRANSFAC yes 26532648
chr1 8300369 8300374 MYC TRANSFAC yes 118224756
chr1 8300369 8300374 USF1 TRANSFAC yes 118224757
chr1 8300369 8300374 USF2 TRANSFAC yes 118224758
chr1 8300369 8300376 USF1 JASPAR yes 26532649
chr1 8300369 8300376 USF1 JASPAR yes 118224759
chr1 8300375 8300388 SMAD2 JASPAR yes 26532650
chr1 8300375 8300388 SMAD2 JASPAR yes 118224760
chr1 8300380 8300388 TBX15 JASPAR yes 26532651
chr1 8300380 8300388 TBX4 JASPAR yes 26532652
chr1 8300380 8300388 TBX15 JASPAR yes 118224761
chr1 8300380 8300388 TBX4 JASPAR yes 118224762
chr1 8300380 8300389 ZEB1 JASPAR yes 26532653
chr1 8300380 8300389 ZEB1 JASPAR yes 118224763
chr1 8300381 8300391 ID4 JASPAR yes 26532654
chr1 8300381 8300391 NHLH1 JASPAR yes 26532655
chr1 8300381 8300391 TCF3 JASPAR yes 26532656
chr1 8300381 8300391 TCF4 JASPAR yes 26532657
chr1 8300381 8300391 ID4 JASPAR yes 118224764
chr1 8300381 8300391 NHLH1 JASPAR yes 118224765
chr1 8300381 8300391 TCF3 JASPAR yes 118224766
chr1 8300381 8300391 TCF4 JASPAR yes 118224767
chr1 8300382 8300391 SNAI2 JASPAR yes 26532658
chr1 8300382 8300391 SNAI2 JASPAR yes 118224768
chr1 8300383 8300388 USF2 TRANSFAC yes 26532659
chr1 8300383 8300388 USF2 TRANSFAC yes 118224769
chr1 8300388 8300403 MAFK JASPAR yes 26532660
chr1 8300388 8300403 MAFK JASPAR yes 118224770
chr1 8300389 8300393 YY1 TRANSFAC yes 26532661
chr1 8300389 8300393 YY1 TRANSFAC yes 118224771
SNP sites on vista243[chr1:8300045-8300389]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 8300159 rs397955865 G GC
REST
53688
chr1 8300159 rs59408889 G GC
REST
53689
chr1 8300166 rs182615290 G A
NHLH1 REST
53690
chr1 8300187 rs189023408 C T
ID4 SNAI2 TCF3 TCF4 ZEB1
53691
chr1 8300252 rs12125294 G C no 53692
chr1 8300317 rs299506 C T
PAX1 PAX9
53693
chr1 8300364 rs561884319 C T
FOXP2 GLIS2 MSC MYF6 NFE2 NHLH1 REST TFAP4 ZBTB18 ZIC1 ZIC4
53694
Genes possibly regulated by vista243[chr1:8300045-8300389]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 8377886 8404227 + SLC45A1 ENSG00000162426.10 8377886 0.83 1.0 115 22503
Expression level of Genes
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miRNAs possibly regulated by vista243[chr1:8300045-8300389]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results