EnhancerDB
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  3. rs189023408[chr1:8300187]
Enhancers that have rs189023408[chr1:8300187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8295840 8303975 enh11467
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Breast Uterus Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Heart
chr1 8300045 8300389 vista243
VISTA
Transcript factors that have rs189023408[chr1:8300187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8300178 8300187 SNAI2 JASPAR yes 26532613
chr1 8300178 8300187 SNAI2 JASPAR yes 118224723
chr1 8300178 8300188 ID4 JASPAR yes 26532614
chr1 8300178 8300188 TCF3 JASPAR yes 26532615
chr1 8300178 8300188 TCF4 JASPAR yes 26532616
chr1 8300178 8300188 ID4 JASPAR yes 118224724
chr1 8300178 8300188 TCF3 JASPAR yes 118224725
chr1 8300178 8300188 TCF4 JASPAR yes 118224726
chr1 8300180 8300189 ZEB1 JASPAR yes 26532617
chr1 8300180 8300189 ZEB1 JASPAR yes 118224727
Genes associated with rs189023408[chr1:8300187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More