EnhancerDB
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  3. vista24326[chr17:27439260-27439514]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24326[chr17:27439260-27439514]
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Tissue distribution of vista24326
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Transcription factor that possibly regulate vista24326[chr17:27439260-27439514]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27438847 27439415 CTCF UCSC Txn Factor no Conserved 108246433
chr17 27439260 27439278 ESR1 JASPAR yes 21214752
chr17 27439260 27439278 ESR1 JASPAR yes 53715036
chr17 27439297 27439302 ETS2 TRANSFAC yes 21214753
chr17 27439297 27439302 ETS2 TRANSFAC yes 53715037
chr17 27439304 27439308 NFE TRANSFAC yes 21214754
chr17 27439304 27439308 NFE TRANSFAC yes 53715038
chr17 27439307 27439319 HNF1B JASPAR yes 21214755
chr17 27439307 27439319 HNF1B JASPAR yes 53715039
chr17 27439314 27439322 MEIS2 JASPAR yes 21214756
chr17 27439314 27439322 MEIS3 JASPAR yes 21214757
chr17 27439314 27439322 MEIS2 JASPAR yes 53715040
chr17 27439314 27439322 MEIS3 JASPAR yes 53715041
chr17 27439314 27439327 ZBTB18 JASPAR yes 21214758
chr17 27439314 27439327 ZBTB18 JASPAR yes 53715042
chr17 27439315 27439327 PKNOX1 JASPAR yes 21214759
chr17 27439315 27439327 PKNOX2 JASPAR yes 21214760
chr17 27439315 27439327 TGIF1 JASPAR yes 21214761
chr17 27439315 27439327 TGIF2 JASPAR yes 21214762
chr17 27439315 27439327 PKNOX1 JASPAR yes 53715043
chr17 27439315 27439327 PKNOX2 JASPAR yes 53715044
chr17 27439315 27439327 TGIF1 JASPAR yes 53715045
chr17 27439315 27439327 TGIF2 JASPAR yes 53715046
chr17 27439316 27439326 MSC JASPAR yes 21214763
chr17 27439316 27439326 MYF6 JASPAR yes 21214764
chr17 27439316 27439326 NHLH1 JASPAR yes 21214765
chr17 27439316 27439326 TFAP4 JASPAR yes 21214766
chr17 27439316 27439326 MSC JASPAR yes 53715047
chr17 27439316 27439326 MYF6 JASPAR yes 53715048
chr17 27439316 27439326 NHLH1 JASPAR yes 53715049
chr17 27439316 27439326 TFAP4 JASPAR yes 53715050
chr17 27439328 27439337 PITX3 JASPAR yes 21214767
chr17 27439328 27439337 PITX3 JASPAR yes 53715051
chr17 27439329 27439337 OTX1 JASPAR yes 21214768
chr17 27439329 27439337 OTX2 JASPAR yes 21214769
chr17 27439329 27439337 OTX1 JASPAR yes 53715052
chr17 27439329 27439337 OTX2 JASPAR yes 53715053
chr17 27439371 27439377 YY1 JASPAR yes 21214770
chr17 27439371 27439377 YY1 JASPAR yes 53715054
chr17 27439385 27439402 RXRA JASPAR yes 21214771
chr17 27439385 27439402 RXRA JASPAR yes 53715055
chr17 27439392 27439403 NFE2L2 JASPAR yes 21214772
chr17 27439392 27439403 NFE2L2 JASPAR yes 53715056
chr17 27439396 27439413 RARA JASPAR yes 21214773
chr17 27439396 27439413 RXRA JASPAR yes 21214774
chr17 27439396 27439413 RARA JASPAR yes 53715057
chr17 27439396 27439413 RXRA JASPAR yes 53715058
chr17 27439397 27439401 ESR1 TRANSFAC yes 21214775
chr17 27439397 27439401 ESR1 TRANSFAC yes 53715059
chr17 27439421 27439433 PKNOX1 JASPAR yes 21214776
chr17 27439421 27439433 PKNOX2 JASPAR yes 21214777
chr17 27439421 27439433 TGIF2 JASPAR yes 21214778
chr17 27439421 27439433 PKNOX1 JASPAR yes 53715060
chr17 27439421 27439433 PKNOX2 JASPAR yes 53715061
chr17 27439421 27439433 TGIF2 JASPAR yes 53715062
chr17 27439422 27439433 USF2 JASPAR yes 21214779
chr17 27439422 27439433 USF2 JASPAR yes 53715063
chr17 27439433 27439436 MYB TRANSFAC yes 21214780
chr17 27439433 27439436 MYB TRANSFAC yes 53715064
chr17 27439434 27439448 CREB3L1 JASPAR yes 21214781
chr17 27439434 27439448 CREB3L1 JASPAR yes 53715065
chr17 27439435 27439445 HINFP JASPAR yes 21214782
chr17 27439435 27439445 HINFP JASPAR yes 53715066
chr17 27439439 27439452 SMAD2 JASPAR yes 21214783
chr17 27439439 27439452 SMAD2 JASPAR yes 53715067
chr17 27439467 27439471 LFA1 TRANSFAC yes 21214784
chr17 27439467 27439471 LFA1 TRANSFAC yes 53715068
chr17 27439486 27439491 GATA2 JASPAR yes 21214785
chr17 27439486 27439491 GATA2 JASPAR yes 53715069
chr17 27439491 27439495 NFE TRANSFAC yes 21214786
chr17 27439491 27439495 NFE TRANSFAC yes 53715070
chr17 27439492 27439497 GATA2 JASPAR yes 21214787
chr17 27439492 27439497 GATA2 JASPAR yes 53715071
chr17 27439500 27439511 NFKB1 JASPAR yes 21214788
chr17 27439500 27439511 NFKB1 JASPAR yes 53715072
SNP sites on vista24326[chr17:27439260-27439514]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27439329 rs188442090 G A
CTCF OTX1 OTX2 PITX3
4814952
chr17 27439463 rs571896864 G A no 4814953
Genes possibly regulated by vista24326[chr17:27439260-27439514]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27400528 27507430 - MYO18A ENSG00000196535.10 27507430 0.67 1.0 15595 32084
chr17 27400537 27418537 - TIAF1 ENSG00000221995.4 27418537 0.68 0.99 15596 79277
Expression level of Genes
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miRNAs possibly regulated by vista24326[chr17:27439260-27439514]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results