EnhancerDB
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Enhancers that have rs188442090[chr17:27439329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27432985 27442274 enh88283
Pancreas Bone (Osteoblast)
chr17 27439260 27439514 vista24326
VISTA
Transcript factors that have rs188442090[chr17:27439329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27438739 27439339 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108246431
chr17 27438847 27439415 CTCF UCSC Txn Factor no Conserved 108246433
chr17 27439004 27439524 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108246434
chr17 27439050 27439410 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108246435
chr17 27439328 27439337 PITX3 JASPAR yes 21214767
chr17 27439328 27439337 PITX3 JASPAR yes 53715051
chr17 27439329 27439337 OTX1 JASPAR yes 21214768
chr17 27439329 27439337 OTX2 JASPAR yes 21214769
chr17 27439329 27439337 OTX1 JASPAR yes 53715052
chr17 27439329 27439337 OTX2 JASPAR yes 53715053
Genes associated with rs188442090[chr17:27439329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More