EnhancerDB
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  3. vista24333[chr17:27539560-27540084]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24333[chr17:27539560-27540084]
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Tissue distribution of vista24333
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Transcription factor that possibly regulate vista24333[chr17:27539560-27540084]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27539563 27539573 HOXC10 JASPAR yes 21215141
chr17 27539563 27539573 HOXD11 JASPAR yes 21215142
chr17 27539563 27539573 HOXC10 JASPAR yes 53723385
chr17 27539563 27539573 HOXD11 JASPAR yes 53723386
chr17 27539563 27539579 POU4F2 JASPAR yes 21215143
chr17 27539563 27539579 POU4F3 JASPAR yes 21215144
chr17 27539563 27539579 POU4F2 JASPAR yes 53723387
chr17 27539563 27539579 POU4F3 JASPAR yes 53723388
chr17 27539565 27539579 POU4F1 JASPAR yes 21215145
chr17 27539565 27539579 POU4F1 JASPAR yes 53723389
chr17 27539603 27539620 RXRA JASPAR yes 21215146
chr17 27539603 27539620 RXRA JASPAR yes 53723390
chr17 27539628 27539636 FEV JASPAR yes 21215147
chr17 27539628 27539636 FEV JASPAR yes 53723391
chr17 27539651 27539655 TEAD2 TRANSFAC yes 21215148
chr17 27539651 27539655 TEAD2 TRANSFAC yes 53723392
chr17 27539653 27539656 MYB TRANSFAC yes 21215149
chr17 27539653 27539656 MYB TRANSFAC yes 53723393
chr17 27539661 27539670 PITX3 JASPAR yes 21215150
chr17 27539661 27539670 PITX3 JASPAR yes 53723394
chr17 27539661 27539671 GSC2 JASPAR yes 21215151
chr17 27539661 27539671 GSC2 JASPAR yes 53723395
chr17 27539662 27539670 OTX1 JASPAR yes 21215152
chr17 27539662 27539670 OTX2 JASPAR yes 21215153
chr17 27539662 27539670 RHOXF1 JASPAR yes 21215154
chr17 27539662 27539670 OTX1 JASPAR yes 53723396
chr17 27539662 27539670 OTX2 JASPAR yes 53723397
chr17 27539662 27539670 RHOXF1 JASPAR yes 53723398
chr17 27539670 27539691 IRF1 JASPAR yes 21215155
chr17 27539670 27539691 IRF1 JASPAR yes 53723399
chr17 27539672 27539687 STAT2 JASPAR yes 21215156
chr17 27539672 27539687 STAT2 JASPAR yes 53723400
chr17 27539675 27539696 ZNF263 JASPAR yes 21215157
chr17 27539675 27539696 ZNF263 JASPAR yes 53723401
chr17 27539681 27539702 ZNF263 JASPAR yes 21215158
chr17 27539681 27539702 ZNF263 JASPAR yes 53723402
chr17 27539683 27539693 MZF1 JASPAR yes 21215159
chr17 27539683 27539693 MZF1 JASPAR yes 53723403
chr17 27539686 27539692 SP1 TRANSFAC yes 21215160
chr17 27539686 27539692 SP1 TRANSFAC yes 53723404
chr17 27539686 27539696 SP1 JASPAR yes 21215161
chr17 27539686 27539696 SP1 JASPAR yes 53723405
chr17 27539697 27539710 ELF1 JASPAR yes 21215162
chr17 27539697 27539710 ELF1 JASPAR yes 53723406
chr17 27539698 27539710 EHF JASPAR yes 21215163
chr17 27539698 27539710 ELF1 JASPAR yes 21215164
chr17 27539698 27539710 EHF JASPAR yes 53723407
chr17 27539698 27539710 ELF1 JASPAR yes 53723408
chr17 27539698 27539711 ELF3 JASPAR yes 21215165
chr17 27539698 27539711 ELF3 JASPAR yes 53723409
chr17 27539699 27539710 ELF5 JASPAR yes 21215166
chr17 27539699 27539710 ELF5 JASPAR yes 53723410
chr17 27539701 27539709 FEV JASPAR yes 21215167
chr17 27539701 27539709 FEV JASPAR yes 53723411
chr17 27539763 27539773 LHX6 JASPAR yes 21215168
chr17 27539763 27539773 LHX6 JASPAR yes 53723412
chr17 27539775 27539787 HLF JASPAR yes 21215169
chr17 27539775 27539787 HLF JASPAR yes 53723413
chr17 27539775 27539790 JUND JASPAR yes 21215170
chr17 27539775 27539790 JUND JASPAR yes 53723414
chr17 27539777 27539796 CTCF JASPAR yes 21215171
chr17 27539777 27539796 CTCF JASPAR yes 53723415
chr17 27539784 27539790 ZNF354C JASPAR yes 21215172
chr17 27539784 27539790 ZNF354C JASPAR yes 53723416
chr17 27539797 27539813 NFYA JASPAR yes 21215173
chr17 27539797 27539813 NFYA JASPAR yes 53723417
chr17 27539800 27539815 NFYB JASPAR yes 21215174
chr17 27539800 27539815 NFYB JASPAR yes 53723418
chr17 27539804 27539817 SMAD2 JASPAR yes 21215175
chr17 27539804 27539817 SMAD2 JASPAR yes 53723419
chr17 27539807 27539827 TBX19 JASPAR yes 21215176
chr17 27539807 27539827 TBX19 JASPAR yes 53723420
chr17 27539809 27539825 T JASPAR yes 21215177
chr17 27539809 27539825 T JASPAR yes 53723421
chr17 27539817 27539837 RREB1 JASPAR yes 21215178
chr17 27539817 27539837 RREB1 JASPAR yes 53723422
chr17 27539819 27539839 RREB1 JASPAR yes 21215179
chr17 27539819 27539839 RREB1 JASPAR yes 53723423
chr17 27539824 27539830 TCF4 TRANSFAC yes 21215180
chr17 27539824 27539830 TCF4 TRANSFAC yes 53723424
chr17 27539824 27539839 FOXP1 JASPAR yes 21215181
chr17 27539824 27539839 FOXP1 JASPAR yes 53723425
chr17 27539829 27539843 IRF7 JASPAR yes 21215182
chr17 27539829 27539843 IRF7 JASPAR yes 53723426
chr17 27539831 27539837 TCF4 TRANSFAC yes 21215183
chr17 27539831 27539837 TCF4 TRANSFAC yes 53723427
chr17 27539853 27539864 NFE2L2 JASPAR yes 21215184
chr17 27539853 27539864 NFE2L2 JASPAR yes 53723428
chr17 27539857 27539861 NFE TRANSFAC yes 21215185
chr17 27539857 27539861 NFE TRANSFAC yes 53723429
chr17 27539890 27539908 ESR2 JASPAR yes 21215186
chr17 27539890 27539908 ESR2 JASPAR yes 53723430
chr17 27539901 27539906 GATA2 JASPAR yes 21215187
chr17 27539901 27539906 GATA2 JASPAR yes 53723431
chr17 27539924 27539930 YY1 JASPAR yes 21215188
chr17 27539924 27539930 YY1 JASPAR yes 53723432
chr17 27539991 27540012 IRF1 JASPAR yes 21215189
chr17 27539991 27540012 IRF1 JASPAR yes 53723433
chr17 27539999 27540014 FOXP1 JASPAR yes 21215190
chr17 27539999 27540014 FOXP1 JASPAR yes 53723434
chr17 27540002 27540012 HOXC10 JASPAR yes 21215191
chr17 27540002 27540012 HOXD11 JASPAR yes 21215192
chr17 27540002 27540012 HOXC10 JASPAR yes 53723435
chr17 27540002 27540012 HOXD11 JASPAR yes 53723436
chr17 27540002 27540013 HOXC12 JASPAR yes 21215193
chr17 27540002 27540013 HOXC12 JASPAR yes 53723437
chr17 27540058 27540062 YY1 TRANSFAC yes 21215194
chr17 27540058 27540062 YY1 TRANSFAC yes 53723438
chr17 27540078 27540083 SP1 TRANSFAC yes 21215195
chr17 27540078 27540083 SP1 TRANSFAC yes 53723439
SNP sites on vista24333[chr17:27539560-27540084]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27539652 rs139184974 T C
TEAD2
4815652
chr17 27539701 rs115847901 C T
EHF ELF1 ELF3 ELF5 FEV ZNF263
4815653
chr17 27539764 rs373219496 G GCTGATTAGTATCATTGTGTCATCCA
LHX6
4815654
chr17 27539764 rs550043951 G GCTGATTAGTATCATTGTGTCATCCA
LHX6
4815655
chr17 27539936 rs4965981 G A no 4815656
chr17 27539980 rs113346416 C T no 4815657
Genes possibly regulated by vista24333[chr17:27539560-27540084]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27400528 27507430 - MYO18A ENSG00000196535.10 27507430 0.67 1.0 15595 67870
chr17 27573881 27581512 + CRYBA1 ENSG00000108255.3 27573881 0.81 1.0 15597 66203
chr17 27582854 27621136 - NUFIP2 ENSG00000108256.4 27621136 0.72 0.99 15598 18948
Expression level of Genes
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miRNAs possibly regulated by vista24333[chr17:27539560-27540084]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results