EnhancerDB
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  3. vista24357[chr17:28049478-28050072]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24357[chr17:28049478-28050072]
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Tissue distribution of vista24357
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Transcription factor that possibly regulate vista24357[chr17:28049478-28050072]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28049449 28049649 SPI1 UCSC Txn Factor no Conserved 108248028
chr17 28049521 28050322 POLR2A UCSC Txn Factor no Conserved 108248032
chr17 28049467 28049481 GATA2 JASPAR yes 21216410
chr17 28049467 28049481 GATA2 JASPAR yes 53753555
chr17 28049489 28049495 JUN TRANSFAC yes 21216411
chr17 28049489 28049495 JUN TRANSFAC yes 53753557
chr17 28049493 28049496 MYB TRANSFAC yes 21216412
chr17 28049493 28049496 MYB TRANSFAC yes 53753558
chr17 28049499 28049514 RUNX2 JASPAR yes 21216413
chr17 28049499 28049514 RUNX2 JASPAR yes 53753559
chr17 28049501 28049522 IRF1 JASPAR yes 21216414
chr17 28049501 28049522 IRF1 JASPAR yes 53753560
chr17 28049505 28049520 STAT2 JASPAR yes 21216415
chr17 28049505 28049520 STAT2 JASPAR yes 53753561
chr17 28049506 28049518 IRF1 JASPAR yes 21216416
chr17 28049506 28049518 IRF1 JASPAR yes 53753562
chr17 28049531 28049545 SPI1 JASPAR yes 21216417
chr17 28049531 28049545 SPI1 JASPAR yes 53753563
chr17 28049533 28049546 ELF3 JASPAR yes 21216418
chr17 28049533 28049546 ELF3 JASPAR yes 53753564
chr17 28049537 28049542 ETS2 TRANSFAC yes 21216419
chr17 28049537 28049542 ETS2 TRANSFAC yes 53753565
chr17 28049543 28049557 TLX1 JASPAR yes 21216420
chr17 28049543 28049557 TLX1 JASPAR yes 53753566
chr17 28049553 28049559 SOX10 JASPAR yes 21216421
chr17 28049553 28049559 SOX10 JASPAR yes 53753567
chr17 28049558 28049563 GATA1 TRANSFAC yes 21216422
chr17 28049558 28049563 GATA1 TRANSFAC yes 53753568
chr17 28049579 28049585 SOX10 JASPAR yes 21216423
chr17 28049579 28049585 SOX10 JASPAR yes 53753569
chr17 28049580 28049591 ESRRA JASPAR yes 21216424
chr17 28049580 28049591 ESRRA JASPAR yes 53753570
chr17 28049591 28049601 CEBPG JASPAR yes 21216425
chr17 28049591 28049601 CEBPG JASPAR yes 53753571
chr17 28049612 28049617 ETS2 TRANSFAC yes 21216426
chr17 28049612 28049617 ETS2 TRANSFAC yes 53753572
chr17 28049616 28049623 GATA3 TRANSFAC yes 21216427
chr17 28049616 28049623 GATA3 TRANSFAC yes 53753573
chr17 28049616 28049624 GATA5 JASPAR yes 21216428
chr17 28049616 28049624 GATA5 JASPAR yes 53753574
chr17 28049619 28049622 MYB TRANSFAC yes 21216429
chr17 28049619 28049622 MYB TRANSFAC yes 53753575
chr17 28049630 28049641 FOXA1 JASPAR yes 21216430
chr17 28049630 28049641 FOXA1 JASPAR yes 53753576
chr17 28049632 28049643 FOXP2 JASPAR yes 21216431
chr17 28049632 28049643 FOXP2 JASPAR yes 53753577
chr17 28049633 28049641 FOXO3 JASPAR yes 21216432
chr17 28049633 28049641 FOXO3 JASPAR yes 53753578
chr17 28049637 28049647 MSC JASPAR yes 21216433
chr17 28049637 28049647 MSC JASPAR yes 53753579
chr17 28049642 28049646 NFE TRANSFAC yes 21216434
chr17 28049642 28049646 NFE TRANSFAC yes 53753580
chr17 28049652 28049657 GATA2 JASPAR yes 21216435
chr17 28049652 28049657 GATA2 JASPAR yes 53753581
chr17 28049658 28049675 ZNF410 JASPAR yes 21216436
chr17 28049658 28049675 ZNF410 JASPAR yes 53753582
chr17 28049660 28049680 RREB1 JASPAR yes 21216437
chr17 28049660 28049680 RREB1 JASPAR yes 53753583
chr17 28049671 28049686 FOXP1 JASPAR yes 21216438
chr17 28049671 28049686 FOXP1 JASPAR yes 53753584
chr17 28049714 28049729 FOXP1 JASPAR yes 21216439
chr17 28049714 28049729 FOXP1 JASPAR yes 53753585
chr17 28049714 28049735 IRF1 JASPAR yes 21216440
chr17 28049714 28049735 IRF1 JASPAR yes 53753586
chr17 28049715 28049726 FOXP2 JASPAR yes 21216441
chr17 28049715 28049726 FOXP2 JASPAR yes 53753587
chr17 28049717 28049725 FOXO3 JASPAR yes 21216442
chr17 28049717 28049725 FOXO3 JASPAR yes 53753588
chr17 28049718 28049730 IRF1 JASPAR yes 21216443
chr17 28049718 28049730 IRF1 JASPAR yes 53753589
chr17 28049718 28049732 IRF7 JASPAR yes 21216444
chr17 28049718 28049732 IRF8 JASPAR yes 21216445
chr17 28049718 28049732 IRF7 JASPAR yes 53753590
chr17 28049718 28049732 IRF8 JASPAR yes 53753591
chr17 28049718 28049733 IRF9 JASPAR yes 21216446
chr17 28049718 28049733 IRF9 JASPAR yes 53753592
chr17 28049733 28049754 ZNF263 JASPAR yes 21216447
chr17 28049733 28049754 ZNF263 JASPAR yes 53753593
chr17 28049746 28049756 ZNF740 JASPAR yes 21216448
chr17 28049746 28049756 ZNF740 JASPAR yes 53753594
chr17 28049747 28049752 TFAP2A TRANSFAC yes 21216449
chr17 28049747 28049752 TFAP2A TRANSFAC yes 53753595
chr17 28049747 28049753 MZF1 JASPAR yes 21216450
chr17 28049747 28049753 MZF1 JASPAR yes 53753596
chr17 28049747 28049757 SP1 JASPAR yes 21216451
chr17 28049747 28049757 SP1 JASPAR yes 53753597
chr17 28049749 28049755 MAZ TRANSFAC yes 21216452
chr17 28049749 28049755 MAZ TRANSFAC yes 53753598
chr17 28049754 28049758 LFA1 TRANSFAC yes 21216453
chr17 28049754 28049758 LFA1 TRANSFAC yes 53753599
chr17 28049760 28049775 FOXP1 JASPAR yes 21216454
chr17 28049760 28049775 FOXP1 JASPAR yes 53753600
chr17 28049763 28049774 FOXP2 JASPAR yes 21216455
chr17 28049763 28049774 FOXP2 JASPAR yes 53753601
chr17 28049764 28049772 FOXO3 JASPAR yes 21216456
chr17 28049764 28049772 FOXO3 JASPAR yes 53753602
chr17 28049767 28049773 HiNF-A TRANSFAC yes 21216457
chr17 28049767 28049773 HiNF-A TRANSFAC yes 53753603
chr17 28049772 28049777 MYC TRANSFAC yes 21216458
chr17 28049772 28049777 MYC TRANSFAC yes 53753604
chr17 28049795 28049807 TAL1 JASPAR yes 21216459
chr17 28049795 28049807 TAL1 JASPAR yes 53753605
chr17 28049824 28049837 ZBTB18 JASPAR yes 21216460
chr17 28049824 28049837 ZBTB18 JASPAR yes 53753606
chr17 28049825 28049835 NEUROG2 JASPAR yes 21216461
chr17 28049825 28049835 NEUROG2 JASPAR yes 53753607
chr17 28049834 28049840 SOX10 JASPAR yes 21216462
chr17 28049834 28049840 SOX10 JASPAR yes 53753608
chr17 28049845 28049855 NFATC3 JASPAR yes 21216463
chr17 28049845 28049855 NFATC3 JASPAR yes 53753609
chr17 28049847 28049854 NFATC2 JASPAR yes 21216464
chr17 28049847 28049854 NFATC2 JASPAR yes 53753610
chr17 28049863 28049871 MEIS2 JASPAR yes 21216465
chr17 28049863 28049871 MEIS3 JASPAR yes 21216466
chr17 28049863 28049871 MEIS2 JASPAR yes 53753611
chr17 28049863 28049871 MEIS3 JASPAR yes 53753612
chr17 28049864 28049868 NFE TRANSFAC yes 21216467
chr17 28049864 28049868 NFE TRANSFAC yes 53753613
chr17 28049864 28049871 MEIS1 JASPAR yes 21216468
chr17 28049864 28049871 MEIS1 JASPAR yes 53753614
chr17 28049865 28049878 SCRT2 JASPAR yes 21216469
chr17 28049865 28049878 SCRT2 JASPAR yes 53753615
chr17 28049865 28049880 SCRT1 JASPAR yes 21216470
chr17 28049865 28049880 SCRT1 JASPAR yes 53753616
chr17 28049866 28049874 FOXO3 JASPAR yes 21216471
chr17 28049866 28049874 FOXO3 JASPAR yes 53753617
chr17 28049901 28049916 PRDM1 JASPAR yes 21216472
chr17 28049901 28049916 PRDM1 JASPAR yes 53753618
chr17 28049910 28049924 PAX6 JASPAR yes 21216473
chr17 28049910 28049924 PAX6 JASPAR yes 53753619
chr17 28049971 28049982 DUX4 JASPAR yes 21216474
chr17 28049971 28049982 DUX4 JASPAR yes 53753620
chr17 28049976 28049990 SPI1 JASPAR yes 21216475
chr17 28049976 28049990 SPI1 JASPAR yes 53753621
chr17 28049984 28049988 YY1 TRANSFAC yes 21216476
chr17 28049984 28049988 YY1 TRANSFAC yes 53753622
chr17 28049984 28049995 HOXC13 JASPAR yes 21216477
chr17 28049984 28049995 HOXC13 JASPAR yes 53753623
chr17 28049997 28050007 SP1 JASPAR yes 21216478
chr17 28049997 28050007 SP1 JASPAR yes 53753624
chr17 28050003 28050019 ZNF143 JASPAR yes 21216479
chr17 28050003 28050019 ZNF143 JASPAR yes 53753625
chr17 28050018 28050024 YY1 JASPAR yes 21216480
chr17 28050018 28050024 YY1 JASPAR yes 53753626
chr17 28050034 28050052 SRF JASPAR yes 21216481
chr17 28050034 28050052 SRF JASPAR yes 53753627
chr17 28050059 28050068 THAP1 JASPAR yes 21216482
chr17 28050059 28050068 THAP1 JASPAR yes 53753628
chr17 28050061 28050073 BHLHE23 JASPAR yes 21216483
chr17 28050061 28050073 BHLHE23 JASPAR yes 53753629
chr17 28050062 28050072 BHLHE22 JASPAR yes 21216484
chr17 28050062 28050072 NEUROD2 JASPAR yes 21216485
chr17 28050062 28050072 OLIG2 JASPAR yes 21216486
chr17 28050062 28050072 OLIG3 JASPAR yes 21216487
chr17 28050062 28050072 BHLHE22 JASPAR yes 53753630
chr17 28050062 28050072 NEUROD2 JASPAR yes 53753631
chr17 28050062 28050072 OLIG2 JASPAR yes 53753632
chr17 28050062 28050072 OLIG3 JASPAR yes 53753633
chr17 28050072 28050081 NKX3-2 JASPAR yes 21216488
chr17 28050072 28050081 NKX3-2 JASPAR yes 53753634
chr17 28050072 28050082 NKX2-3 JASPAR yes 21216489
chr17 28050072 28050082 NKX2-3 JASPAR yes 53753635
SNP sites on vista24357[chr17:28049478-28050072]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28049590 rs116018379 C G
ESRRA POLR2A SPI1
4818053
chr17 28049804 rs2617865 G T
POLR2A TAL1
4818054
Genes possibly regulated by vista24357[chr17:28049478-28050072]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27941774 27949925 - CORO6 ENSG00000167549.14 27949925 0.94 1.0 15604 447
Expression level of Genes
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miRNAs possibly regulated by vista24357[chr17:28049478-28050072]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results