EnhancerDB
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  3. rs116018379[chr17:28049590]
Enhancers that have rs116018379[chr17:28049590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
chr17 28049478 28050072 vista24357
VISTA
Transcript factors that have rs116018379[chr17:28049590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28049201 28049751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749552
chr17 28049201 28049751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248021
chr17 28049369 28049719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749553
chr17 28049369 28049719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248022
chr17 28049376 28049632 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749554
chr17 28049376 28049632 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248023
chr17 28049385 28049749 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749555
chr17 28049385 28049749 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248024
chr17 28049428 28049684 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749556
chr17 28049428 28049684 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248025
chr17 28049433 28049757 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749557
chr17 28049433 28049757 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248026
chr17 28049442 28049898 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749558
chr17 28049442 28049898 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248027
chr17 28049449 28049649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749559
chr17 28049449 28049649 SPI1 UCSC Txn Factor no Conserved 108248028
chr17 28049449 28049649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248029
chr17 28049452 28049635 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749560
chr17 28049452 28049635 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248030
chr17 28049457 28049893 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749561
chr17 28049457 28049893 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248031
chr17 28049521 28050322 POLR2A UCSC Txn Factor no Conserved 108248032
chr17 28049553 28050073 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749562
chr17 28049553 28050073 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248033
chr17 28049558 28050122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749563
chr17 28049558 28050122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248034
chr17 28049564 28050064 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749564
chr17 28049564 28050064 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248035
chr17 28049580 28049591 ESRRA JASPAR yes 21216424
chr17 28049580 28049591 ESRRA JASPAR yes 53753570
Genes associated with rs116018379[chr17:28049590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More