EnhancerDB
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  3. vista24368[chr17:28533256-28533617]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24368[chr17:28533256-28533617]
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Tissue distribution of vista24368
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Transcription factor that possibly regulate vista24368[chr17:28533256-28533617]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28533257 28533272 FOXP1 JASPAR yes 21216988
chr17 28533258 28533273 FOXP1 JASPAR yes 21216989
chr17 28533259 28533274 FOXP1 JASPAR yes 21216990
chr17 28533259 28533280 IRF1 JASPAR yes 21216991
chr17 28533260 28533275 FOXP1 JASPAR yes 21216992
chr17 28533260 28533281 IRF1 JASPAR yes 21216993
chr17 28533261 28533276 FOXP1 JASPAR yes 21216994
chr17 28533261 28533282 IRF1 JASPAR yes 21216995
chr17 28533262 28533277 FOXP1 JASPAR yes 21216996
chr17 28533264 28533279 FOXP1 JASPAR yes 21216997
chr17 28533265 28533280 STAT2 JASPAR yes 21216998
chr17 28533266 28533281 FOXP1 JASPAR yes 21216999
chr17 28533268 28533288 RREB1 JASPAR yes 21217000
chr17 28533269 28533280 FOXP2 JASPAR yes 21217001
chr17 28533273 28533279 HiNF-A TRANSFAC yes 21217002
chr17 28533273 28533293 RREB1 JASPAR yes 21217003
chr17 28533277 28533292 FOXP1 JASPAR yes 21217004
chr17 28533279 28533291 FOXC2 JASPAR yes 21217005
chr17 28533280 28533291 FOXP2 JASPAR yes 21217006
chr17 28533286 28533292 SOX10 JASPAR yes 21217007
chr17 28533302 28533308 TCF4 TRANSFAC yes 21217008
chr17 28533336 28533348 JDP2 JASPAR yes 21217009
chr17 28533336 28533351 JUND JASPAR yes 21217010
chr17 28533337 28533350 JUN JASPAR yes 21217011
chr17 28533338 28533345 JUN TRANSFAC yes 21217012
chr17 28533372 28533382 NFIA JASPAR yes 21217013
chr17 28533374 28533380 NFIC JASPAR yes 21217014
chr17 28533393 28533405 YY1 JASPAR yes 21217015
chr17 28533393 28533414 REST JASPAR yes 21217016
chr17 28533394 28533399 GATA2 JASPAR yes 21217017
chr17 28533407 28533427 PPARG JASPAR yes 21217018
chr17 28533410 28533414 LFA1 TRANSFAC yes 21217019
chr17 28533410 28533420 MAX JASPAR yes 21217020
chr17 28533411 28533421 BHLHE40 JASPAR yes 21217021
chr17 28533411 28533421 BHLHE41 JASPAR yes 21217022
chr17 28533411 28533421 HEY1 JASPAR yes 21217023
chr17 28533411 28533421 MLXIPL JASPAR yes 21217024
chr17 28533411 28533421 MLX JASPAR yes 21217025
chr17 28533411 28533421 TFE3 JASPAR yes 21217026
chr17 28533413 28533418 MYC TRANSFAC yes 21217027
chr17 28533413 28533418 USF1 TRANSFAC yes 21217028
chr17 28533413 28533418 USF2 TRANSFAC yes 21217029
chr17 28533421 28533432 ESRRA JASPAR yes 21217030
chr17 28533421 28533432 ESRRB JASPAR yes 21217031
chr17 28533423 28533438 AR JASPAR yes 21217032
chr17 28533426 28533440 IRF7 JASPAR yes 21217033
chr17 28533427 28533433 SOX10 JASPAR yes 21217034
chr17 28533438 28533443 MYB TRANSFAC yes 21217035
chr17 28533448 28533461 SCRT2 JASPAR yes 21217036
chr17 28533448 28533463 SCRT1 JASPAR yes 21217037
chr17 28533451 28533461 MAX JASPAR yes 21217038
chr17 28533452 28533462 CLOCK JASPAR yes 21217039
chr17 28533452 28533462 MAX JASPAR yes 21217040
chr17 28533452 28533462 MNT JASPAR yes 21217041
chr17 28533454 28533459 MYC TRANSFAC yes 21217042
chr17 28533454 28533459 USF1 TRANSFAC yes 21217043
chr17 28533454 28533459 USF2 TRANSFAC yes 21217044
chr17 28533454 28533461 USF1 JASPAR yes 21217045
chr17 28533462 28533476 EBF1 JASPAR yes 21217046
chr17 28533464 28533475 EBF1 JASPAR yes 21217047
chr17 28533491 28533495 H4TF2 TRANSFAC yes 21217048
chr17 28533499 28533510 HOXA10 JASPAR yes 21217049
chr17 28533500 28533509 CDX1 JASPAR yes 21217050
chr17 28533518 28533532 CREB3 JASPAR yes 21217051
chr17 28533518 28533532 CREB3L1 JASPAR yes 21217052
chr17 28533519 28533533 XBP1 JASPAR yes 21217053
chr17 28533521 28533526 ATF1 TRANSFAC yes 21217054
chr17 28533525 28533531 ZNF354C JASPAR yes 21217055
chr17 28533528 28533546 MAFF JASPAR yes 21217056
chr17 28533530 28533545 MAFK JASPAR yes 21217057
chr17 28533545 28533551 LEF1 TRANSFAC yes 21217058
chr17 28533545 28533551 SOX10 JASPAR yes 21217059
chr17 28533546 28533557 DMRT3 JASPAR yes 21217060
chr17 28533566 28533582 POU4F2 JASPAR yes 21217061
chr17 28533575 28533590 FOXP1 JASPAR yes 21217062
chr17 28533576 28533587 FOXA1 JASPAR yes 21217063
chr17 28533576 28533591 FOXA1 JASPAR yes 21217064
chr17 28533578 28533589 FOXP2 JASPAR yes 21217065
chr17 28533579 28533587 FOXO3 JASPAR yes 21217066
chr17 28533580 28533587 FOXD2 JASPAR yes 21217067
chr17 28533580 28533587 FOXI1 JASPAR yes 21217068
chr17 28533580 28533587 FOXL1 JASPAR yes 21217069
chr17 28533580 28533587 FOXO4 JASPAR yes 21217070
chr17 28533580 28533587 FOXO6 JASPAR yes 21217071
chr17 28533580 28533587 FOXP3 JASPAR yes 21217072
chr17 28533580 28533588 FOXD1 JASPAR yes 21217073
chr17 28533580 28533588 FOXG1 JASPAR yes 21217074
chr17 28533580 28533588 FOXO3 JASPAR yes 21217075
chr17 28533582 28533588 HiNF-A TRANSFAC yes 21217076
SNP sites on vista24368[chr17:28533256-28533617]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28533281 rs12150096 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1
4819905
chr17 28533297 rs142304589 A G no 4819906
chr17 28533546 rs187524393 C T
DMRT3 LEF1 MAFF SOX10
4819907
Genes possibly regulated by vista24368[chr17:28533256-28533617]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28442539 28513493 + NSRP1 ENSG00000126653.11 28442539 0.6 0.99 15607 9283
chr17 28521337 28563020 - SLC6A4 ENSG00000108576.5 28563020 0.96 0.95 15608 70597
chr17 28575218 28619074 - BLMH ENSG00000108578.10 28619074 0.72 0.99 15609 14543
Expression level of Genes
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miRNAs possibly regulated by vista24368[chr17:28533256-28533617]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 28444113 28444135 - hsa-miR-3184-3p MIMAT0022731 28444495 0.0017789100948939107 0.838147 0.676023 685
Expression level of miRNAs
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