-
Home
- SNP
- rs12150096[chr17:28533281]
Enhancers that have rs12150096[chr17:28533281]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
28533256 |
28533617 |
vista24368 |
|
|
Transcript factors that have rs12150096[chr17:28533281]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
28531044
|
28534488
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108248380
|
|
|
chr17
|
28531850
|
28533529
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108248381
|
|
|
chr17
|
28532091
|
28534063
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108248382
|
|
|
chr17
|
28532406
|
28533818
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248383
|
|
|
chr17
|
28532443
|
28533664
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248384
|
|
|
chr17
|
28532578
|
28534145
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108248386
|
|
|
chr17
|
28532592
|
28533632
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248387
|
|
|
chr17
|
28532620
|
28534018
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108248388
|
|
|
chr17
|
28532622
|
28533765
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248389
|
|
|
chr17
|
28532638
|
28533472
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248390
|
|
|
chr17
|
28532667
|
28533437
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248391
|
|
|
chr17
|
28532671
|
28533716
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248392
|
|
|
chr17
|
28532678
|
28533437
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248393
|
|
|
chr17
|
28532681
|
28533774
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248394
|
|
|
chr17
|
28532683
|
28533634
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248395
|
|
|
chr17
|
28532707
|
28533716
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248396
|
|
|
chr17
|
28532715
|
28534467
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248397
|
|
|
chr17
|
28532722
|
28533946
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108248398
|
|
|
chr17
|
28532738
|
28533909
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248399
|
|
|
chr17
|
28532769
|
28533350
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248400
|
|
|
chr17
|
28532791
|
28533337
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248401
|
|
|
chr17
|
28532794
|
28533615
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108248402
|
|
|
chr17
|
28532814
|
28533622
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108248403
|
|
|
chr17
|
28532820
|
28534114
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248404
|
|
|
chr17
|
28532828
|
28533893
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248405
|
|
|
chr17
|
28532863
|
28533855
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248406
|
|
|
chr17
|
28532874
|
28533772
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248407
|
|
|
chr17
|
28532882
|
28533680
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248408
|
|
|
chr17
|
28532887
|
28533479
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108248409
|
|
|
chr17
|
28532924
|
28533683
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
108248410
|
|
|
chr17
|
28532948
|
28533667
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248411
|
|
|
chr17
|
28532995
|
28533537
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108248412
|
|
|
chr17
|
28532995
|
28533804
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248413
|
|
|
chr17
|
28533029
|
28533582
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108248414
|
|
|
chr17
|
28533099
|
28533590
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108248415
|
|
|
chr17
|
28533170
|
28533502
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248416
|
|
|
chr17
|
28533260
|
28533281
|
IRF1
|
JASPAR
|
yes
|
|
21216993
|
|
|
chr17
|
28533261
|
28533282
|
IRF1
|
JASPAR
|
yes
|
|
21216995
|
|
|
chr17
|
28533264
|
28533866
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108248417
|
|
|
chr17
|
28533266
|
28533281
|
FOXP1
|
JASPAR
|
yes
|
|
21216999
|
|
|
chr17
|
28533268
|
28533288
|
RREB1
|
JASPAR
|
yes
|
|
21217000
|
|
|
chr17
|
28533273
|
28533293
|
RREB1
|
JASPAR
|
yes
|
|
21217003
|
|
|
chr17
|
28533277
|
28533292
|
FOXP1
|
JASPAR
|
yes
|
|
21217004
|
|
|
chr17
|
28533279
|
28533291
|
FOXC2
|
JASPAR
|
yes
|
|
21217005
|
|
|
chr17
|
28533280
|
28533291
|
FOXP2
|
JASPAR
|
yes
|
|
21217006
|
|
Genes associated with rs12150096[chr17:28533281], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |