EnhancerDB
  1. Home
  2. Enhancers
  3. vista24402[chr17:29821482-29821571]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24402[chr17:29821482-29821571]
Back to top
Tissue distribution of vista24402
Back to top
Transcription factor that possibly regulate vista24402[chr17:29821482-29821571]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29821224 29821534 POU2F2 UCSC Txn Factor no Conserved 108249436
chr17 29821271 29821517 RUNX3 UCSC Txn Factor no Conserved 108249439
chr17 29821476 29821488 PBX1 JASPAR yes 21218598
chr17 29821476 29821488 PBX1 JASPAR yes 53842398
chr17 29821484 29821495 JUNB JASPAR yes 21218599
chr17 29821484 29821495 JUNB JASPAR yes 53842399
chr17 29821485 29821496 FOSL1 JASPAR yes 21218600
chr17 29821485 29821496 JUND JASPAR yes 21218601
chr17 29821485 29821496 FOSL1 JASPAR yes 53842400
chr17 29821485 29821496 JUND JASPAR yes 53842401
chr17 29821486 29821493 JUN TRANSFAC yes 21218602
chr17 29821486 29821493 JUN TRANSFAC yes 53842402
chr17 29821494 29821497 MYB TRANSFAC yes 21218603
chr17 29821494 29821497 MYB TRANSFAC yes 53842403
chr17 29821494 29821508 RXRB JASPAR yes 21218604
chr17 29821494 29821508 RXRG JASPAR yes 21218605
chr17 29821494 29821508 RXRB JASPAR yes 53842404
chr17 29821494 29821508 RXRG JASPAR yes 53842405
chr17 29821496 29821509 EOMES JASPAR yes 21218606
chr17 29821496 29821509 EOMES JASPAR yes 53842406
chr17 29821498 29821508 TBR1 JASPAR yes 21218607
chr17 29821498 29821508 TBR1 JASPAR yes 53842407
chr17 29821498 29821509 TBX2 JASPAR yes 21218608
chr17 29821498 29821509 TBX2 JASPAR yes 53842408
chr17 29821499 29821509 TBX21 JASPAR yes 21218609
chr17 29821499 29821509 TBX21 JASPAR yes 53842409
chr17 29821500 29821508 TBX15 JASPAR yes 21218610
chr17 29821500 29821508 TBX4 JASPAR yes 21218611
chr17 29821500 29821508 TBX15 JASPAR yes 53842410
chr17 29821500 29821508 TBX4 JASPAR yes 53842411
chr17 29821507 29821510 MYB TRANSFAC yes 21218612
chr17 29821507 29821510 MYB TRANSFAC yes 53842412
chr17 29821539 29821553 SPIC JASPAR yes 21218613
chr17 29821539 29821553 SPIC JASPAR yes 53842413
chr17 29821543 29821553 GABPA JASPAR yes 21218614
chr17 29821543 29821553 GABPA JASPAR yes 53842414
chr17 29821543 29821554 FLI1 JASPAR yes 21218615
chr17 29821543 29821554 FLI1 JASPAR yes 53842415
chr17 29821544 29821552 EHF JASPAR yes 21218616
chr17 29821544 29821552 EHF JASPAR yes 53842416
chr17 29821556 29821566 NFATC3 JASPAR yes 21218617
chr17 29821556 29821566 NFATC3 JASPAR yes 53842417
chr17 29821558 29821564 ETS1 JASPAR yes 21218618
chr17 29821558 29821564 ETS1 JASPAR yes 53842418
chr17 29821569 29821573 YY1 TRANSFAC yes 21218619
chr17 29821569 29821573 YY1 TRANSFAC yes 53842419
SNP sites on vista24402[chr17:29821482-29821571]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29821502 rs75597204 C A
EOMES POU2F2 RUNX3 RXRB RXRG TBR1 TBX15 TBX2 TBX21 TBX4
4826058
chr17 29821539 rs549301668 C T
SPIC
4826059
Genes possibly regulated by vista24402[chr17:29821482-29821571]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29898161 29902678 + AC003101.1 ENSG00000228768.1 29898161 0.0 1.0 15625 23410
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24402[chr17:29821482-29821571]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results