EnhancerDB
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  3. vista24412[chr17:29923737-29923924]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24412[chr17:29923737-29923924]
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Tissue distribution of vista24412
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Transcription factor that possibly regulate vista24412[chr17:29923737-29923924]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29923615 29923931 EBF1 UCSC Txn Factor no Conserved 108249682
chr17 29923724 29923931 FOS UCSC Txn Factor no Conserved 108249698
chr17 29923736 29923745 THAP1 JASPAR yes 21219109
chr17 29923736 29923745 THAP1 JASPAR yes 53849198
chr17 29923757 29923778 REST JASPAR yes 21219110
chr17 29923757 29923778 REST JASPAR yes 53849199
chr17 29923783 29923792 THAP1 JASPAR yes 21219111
chr17 29923783 29923792 THAP1 JASPAR yes 53849200
chr17 29923799 29923810 TFAP2A JASPAR yes 21219112
chr17 29923799 29923810 TFAP2B JASPAR yes 21219113
chr17 29923799 29923810 TFAP2C JASPAR yes 21219114
chr17 29923799 29923810 TFAP2A JASPAR yes 53849201
chr17 29923799 29923810 TFAP2B JASPAR yes 53849202
chr17 29923799 29923810 TFAP2C JASPAR yes 53849203
chr17 29923808 29923826 ESR2 JASPAR yes 21219115
chr17 29923808 29923826 ESR2 JASPAR yes 53849204
chr17 29923810 29923815 SP1 TRANSFAC yes 21219116
chr17 29923810 29923815 SP1 TRANSFAC yes 53849205
chr17 29923812 29923826 JUN JASPAR yes 21219117
chr17 29923812 29923826 JUN JASPAR yes 53849206
chr17 29923815 29923826 FOSL2 JASPAR yes 21219118
chr17 29923815 29923826 JUNB JASPAR yes 21219119
chr17 29923815 29923826 FOSL2 JASPAR yes 53849207
chr17 29923815 29923826 JUNB JASPAR yes 53849208
chr17 29923816 29923827 FOS JASPAR yes 21219120
chr17 29923816 29923827 FOSL1 JASPAR yes 21219121
chr17 29923816 29923827 JUND JASPAR yes 21219122
chr17 29923816 29923827 FOS JASPAR yes 53849209
chr17 29923816 29923827 FOSL1 JASPAR yes 53849210
chr17 29923816 29923827 JUND JASPAR yes 53849211
chr17 29923817 29923824 JUN TRANSFAC yes 21219123
chr17 29923817 29923824 JUN TRANSFAC yes 53849212
chr17 29923835 29923840 SP1 TRANSFAC yes 21219124
chr17 29923835 29923840 SP1 TRANSFAC yes 53849213
chr17 29923844 29923851 PEA3 TRANSFAC yes 21219125
chr17 29923844 29923851 PEA3 TRANSFAC yes 53849214
chr17 29923875 29923885 RELA JASPAR yes 21219126
chr17 29923875 29923885 RELA JASPAR yes 53849215
chr17 29923886 29923901 MEF2A JASPAR yes 21219127
chr17 29923886 29923901 MEF2A JASPAR yes 53849216
chr17 29923887 29923902 MEF2C JASPAR yes 21219128
chr17 29923887 29923902 MEF2C JASPAR yes 53849217
chr17 29923888 29923900 MEF2A JASPAR yes 21219129
chr17 29923888 29923900 MEF2B JASPAR yes 21219130
chr17 29923888 29923900 MEF2D JASPAR yes 21219131
chr17 29923888 29923900 MEF2A JASPAR yes 53849218
chr17 29923888 29923900 MEF2B JASPAR yes 53849219
chr17 29923888 29923900 MEF2D JASPAR yes 53849220
chr17 29923889 29923899 MEF2A JASPAR yes 21219132
chr17 29923889 29923899 MEF2A JASPAR yes 53849221
chr17 29923890 29923894 YY1 TRANSFAC yes 21219133
chr17 29923890 29923894 YY1 TRANSFAC yes 53849222
chr17 29923890 29923900 HOXB13 JASPAR yes 21219134
chr17 29923890 29923900 HOXB13 JASPAR yes 53849223
chr17 29923902 29923914 NHLH1 JASPAR yes 21219135
chr17 29923902 29923914 NHLH1 JASPAR yes 53849224
chr17 29923924 29923937 ELF1 JASPAR yes 21219136
chr17 29923924 29923937 ELF1 JASPAR yes 53849225
SNP sites on vista24412[chr17:29923737-29923924]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29923773 rs190743593 G A
EBF1 FOS REST
4826923
chr17 29923807 rs138334607 G A
EBF1 FOS TFAP2A TFAP2B TFAP2C
4826924
chr17 29923866 rs369305515 T C
EBF1 FOS
4826925
chr17 29923904 rs538296827 C T
EBF1 FOS NHLH1
4826926
Genes possibly regulated by vista24412[chr17:29923737-29923924]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29898161 29902678 + AC003101.1 ENSG00000228768.1 29898161 0.0 1.0 15625 74424
Expression level of Genes
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miRNAs possibly regulated by vista24412[chr17:29923737-29923924]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results