EnhancerDB
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  3. rs538296827[chr17:29923904]
Enhancers that have rs538296827[chr17:29923904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29918764 29929790 enh17097
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Heart
chr17 29923737 29923924 vista24412
VISTA
Transcript factors that have rs538296827[chr17:29923904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29923533 29924049 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750205
chr17 29923533 29924049 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249679
chr17 29923579 29924109 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750206
chr17 29923579 29924109 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249680
chr17 29923595 29924065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21750207
chr17 29923595 29924065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108249681
chr17 29923615 29923931 EBF1 UCSC Txn Factor no Conserved 108249682
chr17 29923616 29924052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249683
chr17 29923617 29923927 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21750208
chr17 29923617 29923927 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108249684
chr17 29923623 29924033 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21750209
chr17 29923623 29924033 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108249685
chr17 29923636 29923992 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21750210
chr17 29923636 29923992 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108249686
chr17 29923643 29923923 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108249688
chr17 29923643 29924039 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750211
chr17 29923643 29924039 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249689
chr17 29923653 29923913 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108249690
chr17 29923657 29924007 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21750212
chr17 29923657 29924007 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108249691
chr17 29923658 29924034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750213
chr17 29923658 29924034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249692
chr17 29923665 29924002 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21750214
chr17 29923665 29924002 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108249693
chr17 29923684 29923948 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249694
chr17 29923687 29924047 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750215
chr17 29923687 29924047 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249695
chr17 29923699 29923955 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21750216
chr17 29923699 29923955 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108249696
chr17 29923717 29923987 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108249697
chr17 29923724 29923931 FOS UCSC Txn Factor no Conserved 108249698
chr17 29923763 29924023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750217
chr17 29923763 29924023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249700
chr17 29923775 29924509 ZNF274 GTRD no Blood (GM12878) 108249701
chr17 29923787 29923980 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21750218
chr17 29923787 29923980 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108249702
chr17 29923902 29923914 NHLH1 JASPAR yes 21219135
chr17 29923902 29923914 NHLH1 JASPAR yes 53849224
Genes associated with rs538296827[chr17:29923904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More