EnhancerDB
  1. Home
  2. Enhancers
  3. vista24423[chr17:30463864-30464107]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24423[chr17:30463864-30464107]
Back to top
Tissue distribution of vista24423
Back to top
Transcription factor that possibly regulate vista24423[chr17:30463864-30464107]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 30463938 30464366 GATA1 UCSC Txn Factor no Conserved 108249883
chr17 30463864 30463867 MYB TRANSFAC yes 21219620
chr17 30463864 30463867 MYB TRANSFAC yes 53875522
chr17 30463864 30463878 TCF7L2 JASPAR yes 21219621
chr17 30463864 30463878 TCF7L2 JASPAR yes 53875523
chr17 30463871 30463886 LEF1 JASPAR yes 21219622
chr17 30463871 30463886 LEF1 JASPAR yes 53875524
chr17 30463880 30463886 GATA3 JASPAR yes 21219623
chr17 30463880 30463886 GATA3 JASPAR yes 53875525
chr17 30463885 30463890 SP1 TRANSFAC yes 21219624
chr17 30463885 30463890 SP1 TRANSFAC yes 53875526
chr17 30463907 30463916 NFIX JASPAR yes 21219625
chr17 30463907 30463916 NFIX JASPAR yes 53875527
chr17 30463909 30463915 NFIC JASPAR yes 21219626
chr17 30463909 30463915 NFIC JASPAR yes 53875528
chr17 30463921 30463933 FOXI1 JASPAR yes 21219627
chr17 30463921 30463933 FOXI1 JASPAR yes 53875529
chr17 30463924 30463928 YY1 TRANSFAC yes 21219628
chr17 30463924 30463928 YY1 TRANSFAC yes 53875530
chr17 30463942 30463957 NFYB JASPAR yes 21219629
chr17 30463942 30463957 NFYB JASPAR yes 53875531
chr17 30463944 30463960 NFYA JASPAR yes 21219630
chr17 30463944 30463960 NFYA JASPAR yes 53875532
chr17 30463945 30463963 NFYA JASPAR yes 21219631
chr17 30463945 30463963 NFYA JASPAR yes 53875533
chr17 30463946 30463958 PBX1 JASPAR yes 21219632
chr17 30463946 30463958 PBX1 JASPAR yes 53875534
chr17 30463949 30463953 H1TF2 TRANSFAC yes 21219633
chr17 30463949 30463953 NFE TRANSFAC yes 21219634
chr17 30463949 30463953 SRF TRANSFAC yes 21219635
chr17 30463949 30463953 H1TF2 TRANSFAC yes 53875535
chr17 30463949 30463953 NFE TRANSFAC yes 53875536
chr17 30463949 30463953 SRF TRANSFAC yes 53875537
chr17 30463958 30463963 NFY TRANSFAC yes 21219636
chr17 30463958 30463963 NFY TRANSFAC yes 53875538
chr17 30463959 30463971 E2F8 JASPAR yes 21219637
chr17 30463959 30463971 E2F8 JASPAR yes 53875539
chr17 30463961 30463974 SMAD2 JASPAR yes 21219638
chr17 30463961 30463974 SMAD2 JASPAR yes 53875540
chr17 30463973 30463977 NFE TRANSFAC yes 21219639
chr17 30463973 30463977 NFE TRANSFAC yes 53875541
chr17 30463973 30463986 SMAD2 JASPAR yes 21219640
chr17 30463973 30463986 SMAD2 JASPAR yes 53875542
chr17 30463978 30463981 MYB TRANSFAC yes 21219641
chr17 30463978 30463981 MYB TRANSFAC yes 53875543
chr17 30463978 30463993 NFYB JASPAR yes 21219642
chr17 30463978 30463993 NFYB JASPAR yes 53875544
chr17 30463980 30463996 NFYA JASPAR yes 21219643
chr17 30463980 30463996 NFYA JASPAR yes 53875545
chr17 30463981 30463999 NFYA JASPAR yes 21219644
chr17 30463981 30463999 NFYA JASPAR yes 53875546
chr17 30463982 30463994 PBX1 JASPAR yes 21219645
chr17 30463982 30463994 PBX1 JASPAR yes 53875547
chr17 30463985 30463989 H1TF2 TRANSFAC yes 21219646
chr17 30463985 30463989 NFE TRANSFAC yes 21219647
chr17 30463985 30463989 SRF TRANSFAC yes 21219648
chr17 30463985 30463989 H1TF2 TRANSFAC yes 53875548
chr17 30463985 30463989 NFE TRANSFAC yes 53875549
chr17 30463985 30463989 SRF TRANSFAC yes 53875550
chr17 30463994 30463999 NFY TRANSFAC yes 21219649
chr17 30463994 30463999 NFY TRANSFAC yes 53875551
chr17 30463995 30464007 E2F8 JASPAR yes 21219650
chr17 30463995 30464007 E2F8 JASPAR yes 53875552
chr17 30463997 30464010 SMAD2 JASPAR yes 21219651
chr17 30463997 30464010 SMAD2 JASPAR yes 53875553
chr17 30464009 30464013 NFE TRANSFAC yes 21219652
chr17 30464009 30464013 NFE TRANSFAC yes 53875554
chr17 30464009 30464022 SMAD2 JASPAR yes 21219653
chr17 30464009 30464022 SMAD2 JASPAR yes 53875555
chr17 30464014 30464017 MYB TRANSFAC yes 21219654
chr17 30464014 30464017 MYB TRANSFAC yes 53875556
chr17 30464014 30464029 NFYB JASPAR yes 21219655
chr17 30464014 30464029 NFYB JASPAR yes 53875557
chr17 30464016 30464032 NFYA JASPAR yes 21219656
chr17 30464016 30464032 NFYA JASPAR yes 53875558
chr17 30464017 30464035 NFYA JASPAR yes 21219657
chr17 30464017 30464035 NFYA JASPAR yes 53875559
chr17 30464018 30464030 PBX1 JASPAR yes 21219658
chr17 30464018 30464030 PBX1 JASPAR yes 53875560
chr17 30464021 30464025 H1TF2 TRANSFAC yes 21219659
chr17 30464021 30464025 NFE TRANSFAC yes 21219660
chr17 30464021 30464025 SRF TRANSFAC yes 21219661
chr17 30464021 30464025 H1TF2 TRANSFAC yes 53875561
chr17 30464021 30464025 NFE TRANSFAC yes 53875562
chr17 30464021 30464025 SRF TRANSFAC yes 53875563
chr17 30464033 30464038 SP1 TRANSFAC yes 21219662
chr17 30464033 30464038 SP1 TRANSFAC yes 53875564
chr17 30464041 30464052 E2F6 JASPAR yes 21219663
chr17 30464041 30464052 E2F6 JASPAR yes 53875565
chr17 30464041 30464055 E2F7 JASPAR yes 21219664
chr17 30464041 30464055 E2F7 JASPAR yes 53875566
chr17 30464042 30464054 E2F8 JASPAR yes 21219665
chr17 30464042 30464054 E2F8 JASPAR yes 53875567
chr17 30464050 30464054 H1TF2 TRANSFAC yes 21219666
chr17 30464050 30464054 NFE TRANSFAC yes 21219667
chr17 30464050 30464054 SRF TRANSFAC yes 21219668
chr17 30464050 30464054 H1TF2 TRANSFAC yes 53875568
chr17 30464050 30464054 NFE TRANSFAC yes 53875569
chr17 30464050 30464054 SRF TRANSFAC yes 53875570
chr17 30464050 30464061 ESRRA JASPAR yes 21219669
chr17 30464050 30464061 ESRRA JASPAR yes 53875571
chr17 30464056 30464067 BATF JASPAR yes 21219670
chr17 30464056 30464067 BATF JASPAR yes 53875572
chr17 30464061 30464065 YY1 TRANSFAC yes 21219671
chr17 30464061 30464065 YY1 TRANSFAC yes 53875573
chr17 30464065 30464068 MYB TRANSFAC yes 21219672
chr17 30464065 30464068 MYB TRANSFAC yes 53875574
chr17 30464074 30464082 GATA3 JASPAR yes 21219673
chr17 30464074 30464082 GATA3 JASPAR yes 53875575
chr17 30464101 30464105 YY1 TRANSFAC yes 21219674
chr17 30464101 30464105 YY1 TRANSFAC yes 53875576
SNP sites on vista24423[chr17:30463864-30464107]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 30463885 rs72483203 A G
GATA3 LEF1 SP1
4829785
chr17 30463944 rs533943146 GACTCACCAATCAGAGATTGGTGAGAGACTCTGTCTA G
GATA1 NFYA NFYB
4829786
chr17 30463944 rs60332183 GACTCACCAATCAGAGATTGGTGAGAGACTCTGTCTA G
GATA1 NFYA NFYB
4829787
chr17 30463963 rs145933902 G A
E2F8 GATA1 NFY NFYA SMAD2
4829788
chr17 30463999 rs183567696 G A
E2F8 GATA1 NFY NFYA SMAD2
4829789
Genes possibly regulated by vista24423[chr17:30463864-30464107]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 30468245 30470154 - AC090616.2 ENSG00000214708.4 30470154 0.87 1.0 15630 93953
chr17 30469473 30580393 + RHOT1 ENSG00000126858.12 30469473 0.69 0.99 15631 94634
chr17 30506379 30506885 - AC116407.2 ENSG00000269402.1 30506885 0.69 1.0 15632 57222
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24423[chr17:30463864-30464107]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results