EnhancerDB
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  3. vista24548[chr17:34223301-34223445]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24548[chr17:34223301-34223445]
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Tissue distribution of vista24548
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Transcription factor that possibly regulate vista24548[chr17:34223301-34223445]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 34223203 34223612 RUNX3 UCSC Txn Factor no Conserved 108251395
chr17 34223288 34223303 MEF2C JASPAR yes 21226190
chr17 34223288 34223303 MEF2C JASPAR yes 54020271
chr17 34223320 34223334 PLAG1 JASPAR yes 21226191
chr17 34223320 34223334 PLAG1 JASPAR yes 54020272
chr17 34223360 34223363 MYB TRANSFAC yes 21226192
chr17 34223360 34223363 MYB TRANSFAC yes 54020273
chr17 34223367 34223372 ETS2 TRANSFAC yes 21226193
chr17 34223367 34223372 ETS2 TRANSFAC yes 54020274
chr17 34223379 34223389 NEUROD2 JASPAR yes 21226194
chr17 34223379 34223389 NEUROD2 JASPAR yes 54020275
chr17 34223380 34223390 MAX JASPAR yes 21226195
chr17 34223380 34223390 MAX JASPAR yes 54020276
chr17 34223402 34223419 ZNF410 JASPAR yes 21226196
chr17 34223402 34223419 ZNF410 JASPAR yes 54020277
chr17 34223414 34223422 EHF JASPAR yes 21226197
chr17 34223414 34223422 EHF JASPAR yes 54020278
chr17 34223428 34223447 RFX2 JASPAR yes 21226198
chr17 34223428 34223447 RFX2 JASPAR yes 54020279
chr17 34223432 34223448 RFX2 JASPAR yes 21226199
chr17 34223432 34223448 RFX3 JASPAR yes 21226200
chr17 34223432 34223448 RFX4 JASPAR yes 21226201
chr17 34223432 34223448 RFX5 JASPAR yes 21226202
chr17 34223432 34223448 RFX2 JASPAR yes 54020280
chr17 34223432 34223448 RFX3 JASPAR yes 54020281
chr17 34223432 34223448 RFX4 JASPAR yes 54020282
chr17 34223432 34223448 RFX5 JASPAR yes 54020283
SNP sites on vista24548[chr17:34223301-34223445]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 34223327 rs56111312 G A
PLAG1 RUNX3
4845999
Genes possibly regulated by vista24548[chr17:34223301-34223445]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 34136459 34191619 + TAF15 ENSG00000172660.7 34136459 0.74 1.0 15673 13158
chr17 34181955 34195895 - C17orf66 ENSG00000172653.7 34195895 0.89 1.0 15674 72594
chr17 34198495 34207797 - CCL5 ENSG00000161570.4 34207797 0.96 0.92 15675 84496
chr17 34245070 34257777 - RDM1 ENSG00000187456.9 34257777 0.95 1.0 15676 65668
chr17 34261522 34270703 - LYZL6 ENSG00000161572.6 34270703 0.0 0.0 15677 52742
chr17 34303529 34308532 - CCL16 ENSG00000161573.6 34308532 0.99 0.99 15678 14913
chr17 34310692 34317306 + CTB-186H2.3 ENSG00000266956.1 34310692 0.97 0.0 15681 12753
Expression level of Genes
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miRNAs possibly regulated by vista24548[chr17:34223301-34223445]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results