EnhancerDB
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  3. rs56111312[chr17:34223327]
Enhancers that have rs56111312[chr17:34223327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 34223301 34223445 vista24548
VISTA
Transcript factors that have rs56111312[chr17:34223327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34222769 34223350 ZNF274 GTRD no Bone Marrow (K562) 108251386
chr17 34222772 34223566 SOX2 GTRD no Neural Stem Cells (H9) 21751096
chr17 34222772 34223566 SOX2 GTRD no Neural Stem Cells (H9) 108251387
chr17 34222851 34223348 ZNF274 GTRD no Liver (HepG2) 108251388
chr17 34222884 34223386 ZNF274 GTRD no Liver (HepG2) 108251389
chr17 34222975 34223635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751097
chr17 34222975 34223635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251390
chr17 34222987 34223583 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751098
chr17 34222987 34223583 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251391
chr17 34223019 34223703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751099
chr17 34223019 34223703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251392
chr17 34223065 34223585 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751101
chr17 34223065 34223585 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251394
chr17 34223203 34223612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751103
chr17 34223203 34223612 RUNX3 UCSC Txn Factor no Conserved 108251395
chr17 34223203 34223612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251396
chr17 34223320 34223334 PLAG1 JASPAR yes 21226191
chr17 34223320 34223334 PLAG1 JASPAR yes 54020272
Genes associated with rs56111312[chr17:34223327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More