EnhancerDB
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  3. vista24689[chr17:38266320-38266663]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24689[chr17:38266320-38266663]
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Tissue distribution of vista24689
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Transcription factor that possibly regulate vista24689[chr17:38266320-38266663]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38266615 38267059 GATA2 UCSC Txn Factor no Conserved 108254185
chr17 38266337 38266347 NFKB1 JASPAR yes 21232788
chr17 38266337 38266347 REL JASPAR yes 21232789
chr17 38266337 38266347 NFKB1 JASPAR yes 54193804
chr17 38266337 38266347 REL JASPAR yes 54193805
chr17 38266341 38266355 EBF1 JASPAR yes 21232790
chr17 38266341 38266355 EBF1 JASPAR yes 54193806
chr17 38266364 38266378 GATA2 JASPAR yes 21232791
chr17 38266364 38266378 GATA2 JASPAR yes 54193807
chr17 38266366 38266373 GATA3 TRANSFAC yes 21232792
chr17 38266366 38266373 GATA3 TRANSFAC yes 54193808
chr17 38266366 38266374 GATA5 JASPAR yes 21232793
chr17 38266366 38266374 GATA5 JASPAR yes 54193809
chr17 38266369 38266372 MYB TRANSFAC yes 21232794
chr17 38266369 38266372 MYB TRANSFAC yes 54193810
chr17 38266372 38266385 ELF1 JASPAR yes 21232795
chr17 38266372 38266385 ELF1 JASPAR yes 54193811
chr17 38266394 38266411 RARA JASPAR yes 21232796
chr17 38266394 38266411 RXRA JASPAR yes 21232797
chr17 38266394 38266411 RARA JASPAR yes 54193812
chr17 38266394 38266411 RXRA JASPAR yes 54193813
chr17 38266396 38266402 MAZ TRANSFAC yes 21232798
chr17 38266396 38266402 MAZ TRANSFAC yes 54193814
chr17 38266398 38266407 HiNF-C TRANSFAC yes 21232799
chr17 38266398 38266407 HiNF-C TRANSFAC yes 54193815
chr17 38266398 38266408 SP1 JASPAR yes 21232800
chr17 38266398 38266408 SP1 JASPAR yes 54193816
chr17 38266399 38266405 SP1 TRANSFAC yes 21232801
chr17 38266399 38266405 SP1 TRANSFAC yes 54193817
chr17 38266399 38266409 SP1 JASPAR yes 21232802
chr17 38266399 38266409 SP1 JASPAR yes 54193818
chr17 38266400 38266405 SP1 TRANSFAC yes 21232803
chr17 38266400 38266405 SP1 TRANSFAC yes 54193819
chr17 38266401 38266406 SP1 TRANSFAC yes 21232804
chr17 38266401 38266406 SP1 TRANSFAC yes 54193820
chr17 38266401 38266407 SP1 TRANSFAC yes 21232805
chr17 38266401 38266407 SP1 TRANSFAC yes 54193821
chr17 38266406 38266410 ESR1 TRANSFAC yes 21232806
chr17 38266406 38266410 ESR1 TRANSFAC yes 54193822
chr17 38266427 38266435 EHF JASPAR yes 21232807
chr17 38266427 38266435 EHF JASPAR yes 54193823
chr17 38266453 38266464 FOXA1 JASPAR yes 21232808
chr17 38266453 38266464 FOXA1 JASPAR yes 54193824
chr17 38266454 38266461 SPIB JASPAR yes 21232809
chr17 38266454 38266461 SPIB JASPAR yes 54193825
chr17 38266461 38266467 SOX10 JASPAR yes 21232810
chr17 38266461 38266467 SOX10 JASPAR yes 54193826
chr17 38266467 38266471 H4TF2 TRANSFAC yes 21232811
chr17 38266467 38266471 H4TF2 TRANSFAC yes 54193827
chr17 38266468 38266483 TFAP2A JASPAR yes 21232812
chr17 38266468 38266483 TFAP2A JASPAR yes 54193828
chr17 38266469 38266480 TFAP2A JASPAR yes 21232813
chr17 38266469 38266480 TFAP2B JASPAR yes 21232814
chr17 38266469 38266480 TFAP2C JASPAR yes 21232815
chr17 38266469 38266480 TFAP2A JASPAR yes 54193829
chr17 38266469 38266480 TFAP2B JASPAR yes 54193830
chr17 38266469 38266480 TFAP2C JASPAR yes 54193831
chr17 38266495 38266513 IRF2 JASPAR yes 21232816
chr17 38266495 38266513 IRF2 JASPAR yes 54193832
chr17 38266568 38266581 POU2F2 JASPAR yes 21232817
chr17 38266568 38266581 POU2F2 JASPAR yes 54193833
chr17 38266574 38266585 YY2 JASPAR yes 21232818
chr17 38266574 38266585 YY2 JASPAR yes 54193834
chr17 38266577 38266591 PLAG1 JASPAR yes 21232819
chr17 38266577 38266591 PLAG1 JASPAR yes 54193835
chr17 38266578 38266592 PLAG1 JASPAR yes 21232820
chr17 38266578 38266592 PLAG1 JASPAR yes 54193836
chr17 38266581 38266593 INSM1 JASPAR yes 21232821
chr17 38266581 38266593 INSM1 JASPAR yes 54193837
chr17 38266583 38266595 ZBTB7B JASPAR yes 21232822
chr17 38266583 38266595 ZBTB7B JASPAR yes 54193838
chr17 38266586 38266607 ZNF263 JASPAR yes 21232823
chr17 38266586 38266607 ZNF263 JASPAR yes 54193839
chr17 38266593 38266599 MAZ TRANSFAC yes 21232824
chr17 38266593 38266599 MAZ TRANSFAC yes 54193840
chr17 38266609 38266618 HIC2 JASPAR yes 21232825
chr17 38266609 38266618 HIC2 JASPAR yes 54193841
chr17 38266612 38266620 SP1 TRANSFAC yes 21232826
chr17 38266612 38266620 SP1 TRANSFAC yes 54193842
chr17 38266616 38266637 REST JASPAR yes 21232827
chr17 38266616 38266637 REST JASPAR yes 54193843
chr17 38266618 38266639 ZNF263 JASPAR yes 21232828
chr17 38266618 38266639 ZNF263 JASPAR yes 54193844
chr17 38266642 38266657 AR JASPAR yes 21232829
chr17 38266642 38266657 AR JASPAR yes 54193845
SNP sites on vista24689[chr17:38266320-38266663]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38266329 rs540442640 CAGA C no 4865267
Genes possibly regulated by vista24689[chr17:38266320-38266663]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38171614 38174066 + CSF3 ENSG00000108342.8 38171614 0.95 0.99 15755 5294
chr17 38175350 38217468 - MED24 ENSG00000008838.13 38217468 0.65 1.0 15756 51148
chr17 38214543 38250120 + THRA ENSG00000126351.8 38214543 0.69 1.0 15757 48223
chr17 38249040 38256978 - NR1D1 ENSG00000126368.5 38256978 0.77 1.0 15758 90658
chr17 38278551 38293042 + MSL1 ENSG00000188895.7 38278551 0.64 0.99 15759 88112
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 0.64 1.0 15760 70092
chr17 38333263 38351908 + RAPGEFL1 ENSG00000108352.7 38333263 0.92 1.0 15761 33400
Expression level of Genes
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miRNAs possibly regulated by vista24689[chr17:38266320-38266663]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results