EnhancerDB
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  3. rs540442640[chr17:38266329]
Enhancers that have rs540442640[chr17:38266329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38259185 38273195 enh4407
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38266320 38266663 vista24689
VISTA
Transcript factors that have rs540442640[chr17:38266329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38265818 38266826 ZNF143 GTRD no Epithelial (MCF-7) 21753248
chr17 38265818 38266826 ZNF143 GTRD no Epithelial (MCF-7) 108254172
chr17 38265858 38266861 ZNF143 GTRD no Epithelial (MCF-7) 21753250
chr17 38265858 38266861 ZNF143 GTRD no Epithelial (MCF-7) 108254173
chr17 38265859 38266856 ZNF143 GTRD no Epithelial (MCF-7) 21753251
chr17 38265859 38266856 ZNF143 GTRD no Epithelial (MCF-7) 108254174
chr17 38265911 38266386 ZNF274 GTRD no Bone Marrow (K562) 21753252
chr17 38265911 38266386 ZNF274 GTRD no Bone Marrow (K562) 108254175
chr17 38265988 38266561 ZNF143 GTRD no Epithelial (MCF-7) 21753253
chr17 38265988 38266561 ZNF143 GTRD no Epithelial (MCF-7) 108254176
chr17 38266004 38266907 ZNF143 GTRD no Epithelial (MCF-7) 21753254
chr17 38266004 38266907 ZNF143 GTRD no Epithelial (MCF-7) 108254177
chr17 38266045 38266503 ZNF143 GTRD no Epithelial (MCF-7) 21753255
chr17 38266045 38266503 ZNF143 GTRD no Epithelial (MCF-7) 108254178
chr17 38266125 38266548 ZNF143 GTRD no Epithelial (MCF-7) 21753256
chr17 38266125 38266548 ZNF143 GTRD no Epithelial (MCF-7) 108254179
chr17 38266141 38266419 ZNF143 GTRD no Epithelial (MCF-7) 21753257
chr17 38266141 38266419 ZNF143 GTRD no Epithelial (MCF-7) 108254180
chr17 38266166 38266584 ZNF143 GTRD no Epithelial (MCF-7) 21753258
chr17 38266166 38266584 ZNF143 GTRD no Epithelial (MCF-7) 108254181
chr17 38266266 38266902 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21753259
chr17 38266266 38266902 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108254182
Genes associated with rs540442640[chr17:38266329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More