EnhancerDB
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  3. vista24693[chr17:38440755-38440955]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24693[chr17:38440755-38440955]
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Tissue distribution of vista24693
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Transcription factor that possibly regulate vista24693[chr17:38440755-38440955]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38440767 38440772 ETS2 TRANSFAC yes 21232935
chr17 38440770 38440779 SOX9 JASPAR yes 21232936
chr17 38440774 38440784 NFATC3 JASPAR yes 21232937
chr17 38440776 38440783 NFATC2 JASPAR yes 21232938
chr17 38440779 38440790 PROP1 JASPAR yes 21232939
chr17 38440780 38440790 PAX7 JASPAR yes 21232940
chr17 38440822 38440828 NFE2 TRANSFAC yes 21232941
chr17 38440830 38440844 PLAG1 JASPAR yes 21232942
chr17 38440839 38440844 TFAP2A TRANSFAC yes 21232943
chr17 38440839 38440845 MZF1 JASPAR yes 21232944
chr17 38440856 38440868 JDP2 JASPAR yes 21232945
chr17 38440856 38440871 JUND JASPAR yes 21232946
chr17 38440857 38440870 JUN JASPAR yes 21232947
chr17 38440858 38440865 JUN TRANSFAC yes 21232948
chr17 38440884 38440888 YY1 TRANSFAC yes 21232949
chr17 38440885 38440898 EOMES JASPAR yes 21232950
chr17 38440887 38440897 TBR1 JASPAR yes 21232951
chr17 38440887 38440898 TBX20 JASPAR yes 21232952
chr17 38440887 38440898 TBX2 JASPAR yes 21232953
chr17 38440888 38440898 TBX21 JASPAR yes 21232954
chr17 38440888 38440902 PAX6 JASPAR yes 21232955
chr17 38440896 38440907 PHOX2A JASPAR yes 21232956
chr17 38440896 38440907 PROP1 JASPAR yes 21232957
chr17 38440898 38440903 MYB TRANSFAC yes 21232958
chr17 38440927 38440938 TBX2 JASPAR yes 21232959
chr17 38440928 38440936 MGA JASPAR yes 21232960
chr17 38440928 38440936 TBX15 JASPAR yes 21232961
chr17 38440928 38440936 TBX1 JASPAR yes 21232962
chr17 38440928 38440936 TBX4 JASPAR yes 21232963
chr17 38440928 38440936 TBX5 JASPAR yes 21232964
chr17 38440928 38440941 SMAD2 JASPAR yes 21232965
chr17 38440933 38440940 JUN TRANSFAC yes 21232966
chr17 38440933 38440940 SP1 TRANSFAC yes 21232967
chr17 38440935 38440949 TCF7L2 JASPAR yes 21232968
SNP sites on vista24693[chr17:38440755-38440955]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38440929 rs59946990 G A
MGA SMAD2 TBX1 TBX15 TBX2 TBX4 TBX5
4866022
Genes possibly regulated by vista24693[chr17:38440755-38440955]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38375556 38440388 + WIPF2 ENSG00000171475.9 38375556 0.73 1.0 15762 34801
chr17 38443885 38459171 + CDC6 ENSG00000094804.5 38443885 0.9 0.99 15763 97070
chr17 38465444 38513094 + RARA ENSG00000131759.13 38465444 0.75 1.0 15764 75511
chr17 38516907 38520945 + CTD-2267D19.3 ENSG00000266208.1 38516907 0.82 0.99 15765 24048
chr17 38517235 38520067 - GJD3 ENSG00000183153.5 38520067 0.97 1.0 15766 20888
Expression level of Genes
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miRNAs possibly regulated by vista24693[chr17:38440755-38440955]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results