EnhancerDB
  1. Home
  2. SNP
  3. rs59946990[chr17:38440929]
Enhancers that have rs59946990[chr17:38440929]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38440755 38440955 vista24693
VISTA
Transcript factors that have rs59946990[chr17:38440929]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38440135 38441140 ZBTB33 GTRD no Lung (A549) 108254206
chr17 38440525 38441159 TCF7L2 GTRD no Colon (HCT116) 108254208
chr17 38440528 38441187 ZNF274 GTRD no Blood (GM12878) 108254209
chr17 38440565 38441649 TCF7L2 GTRD no Colon (HCT116) 108254210
chr17 38440568 38441098 ZBTB33 GTRD no Lung (A549) 108254211
chr17 38440609 38441024 ZNF274 GTRD no Cervix (HeLa-S3) 108254212
chr17 38440656 38440946 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108254213
chr17 38440680 38441020 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108254214
chr17 38440711 38440961 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108254216
chr17 38440713 38441033 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108254217
chr17 38440748 38440978 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108254218
chr17 38440803 38441509 SOX2 GTRD no Neural Stem Cells (H9) 108254219
chr17 38440875 38441398 SOX2 GTRD no Neural Stem Cells (H9) 108254220
chr17 38440927 38440938 TBX2 JASPAR yes 21232959
chr17 38440928 38440936 MGA JASPAR yes 21232960
chr17 38440928 38440936 TBX15 JASPAR yes 21232961
chr17 38440928 38440936 TBX1 JASPAR yes 21232962
chr17 38440928 38440936 TBX4 JASPAR yes 21232963
chr17 38440928 38440936 TBX5 JASPAR yes 21232964
chr17 38440928 38440941 SMAD2 JASPAR yes 21232965
Genes associated with rs59946990[chr17:38440929], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More