EnhancerDB
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  3. vista24708[chr17:38490291-38490758]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24708[chr17:38490291-38490758]
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Tissue distribution of vista24708
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Transcription factor that possibly regulate vista24708[chr17:38490291-38490758]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38490127 38490411 NR3C1 UCSC Txn Factor no Conserved 108254732
chr17 38490290 38490294 NFE TRANSFAC yes 21234460
chr17 38490290 38490294 NFE TRANSFAC yes 54207045
chr17 38490310 38490325 NFYB JASPAR yes 21234461
chr17 38490310 38490325 NFYB JASPAR yes 54207046
chr17 38490314 38490334 RREB1 JASPAR yes 21234462
chr17 38490314 38490334 RREB1 JASPAR yes 54207047
chr17 38490316 38490336 RREB1 JASPAR yes 21234463
chr17 38490316 38490336 RREB1 JASPAR yes 54207048
chr17 38490317 38490332 NR2C2 JASPAR yes 21234464
chr17 38490317 38490332 NR2C2 JASPAR yes 54207049
chr17 38490319 38490339 RREB1 JASPAR yes 21234465
chr17 38490319 38490339 RREB1 JASPAR yes 54207050
chr17 38490324 38490334 SP1 JASPAR yes 21234466
chr17 38490324 38490334 SP1 JASPAR yes 54207051
chr17 38490327 38490332 SP1 TRANSFAC yes 21234467
chr17 38490327 38490332 SP1 TRANSFAC yes 54207052
chr17 38490330 38490340 SP1 JASPAR yes 21234468
chr17 38490330 38490340 SP1 JASPAR yes 54207053
chr17 38490337 38490342 SP1 TRANSFAC yes 21234469
chr17 38490337 38490342 SP1 TRANSFAC yes 54207054
chr17 38490364 38490379 TFAP2A JASPAR yes 21234470
chr17 38490364 38490379 TFAP2C JASPAR yes 21234471
chr17 38490364 38490379 TFAP2A JASPAR yes 54207055
chr17 38490364 38490379 TFAP2C JASPAR yes 54207056
chr17 38490381 38490402 ZNF263 JASPAR yes 21234472
chr17 38490381 38490402 ZNF263 JASPAR yes 54207057
chr17 38490389 38490399 MZF1 JASPAR yes 21234473
chr17 38490389 38490399 MZF1 JASPAR yes 54207058
chr17 38490392 38490398 SP1 TRANSFAC yes 21234474
chr17 38490392 38490398 SP1 TRANSFAC yes 54207059
chr17 38490392 38490402 SP1 JASPAR yes 21234475
chr17 38490392 38490402 SP1 TRANSFAC yes 21234476
chr17 38490392 38490402 SP1 JASPAR yes 54207060
chr17 38490392 38490402 SP1 TRANSFAC yes 54207061
chr17 38490412 38490433 IRF1 JASPAR yes 21234477
chr17 38490412 38490433 IRF1 JASPAR yes 54207062
chr17 38490415 38490428 ELF1 JASPAR yes 21234478
chr17 38490415 38490428 ELF1 JASPAR yes 54207063
chr17 38490415 38490429 SPI1 JASPAR yes 21234479
chr17 38490415 38490429 SPIC JASPAR yes 21234480
chr17 38490415 38490429 SPI1 JASPAR yes 54207064
chr17 38490415 38490429 SPIC JASPAR yes 54207065
chr17 38490418 38490425 SPIB JASPAR yes 21234481
chr17 38490418 38490425 SPIB JASPAR yes 54207066
chr17 38490433 38490438 SP1 TRANSFAC yes 21234482
chr17 38490433 38490438 SP1 TRANSFAC yes 54207067
chr17 38490434 38490444 SP1 JASPAR yes 21234483
chr17 38490434 38490444 SP1 JASPAR yes 54207068
chr17 38490437 38490442 SP1 TRANSFAC yes 21234484
chr17 38490437 38490442 SP1 TRANSFAC yes 54207069
chr17 38490439 38490444 TFAP2A TRANSFAC yes 21234485
chr17 38490439 38490444 TFAP2A TRANSFAC yes 54207070
chr17 38490439 38490445 MZF1 JASPAR yes 21234486
chr17 38490439 38490445 MZF1 JASPAR yes 54207071
chr17 38490441 38490446 ETS2 TRANSFAC yes 21234487
chr17 38490441 38490446 ETS2 TRANSFAC yes 54207072
chr17 38490450 38490467 RXRA JASPAR yes 21234488
chr17 38490450 38490467 RXRA JASPAR yes 54207073
chr17 38490461 38490464 MYB TRANSFAC yes 21234489
chr17 38490461 38490464 MYB TRANSFAC yes 54207074
chr17 38490465 38490477 E2F8 JASPAR yes 21234490
chr17 38490465 38490477 E2F8 JASPAR yes 54207075
chr17 38490469 38490475 MZF1 JASPAR yes 21234491
chr17 38490469 38490475 MZF1 JASPAR yes 54207076
chr17 38490472 38490484 SRF JASPAR yes 21234492
chr17 38490472 38490484 SRF JASPAR yes 54207077
chr17 38490478 38490488 SP1 JASPAR yes 21234493
chr17 38490478 38490488 SP1 JASPAR yes 54207078
chr17 38490479 38490489 SP1 JASPAR yes 21234494
chr17 38490479 38490489 SP1 JASPAR yes 54207079
chr17 38490481 38490486 SP1 TRANSFAC yes 21234495
chr17 38490481 38490486 SP1 TRANSFAC yes 54207080
chr17 38490487 38490496 HIC2 JASPAR yes 21234496
chr17 38490487 38490496 HIC2 JASPAR yes 54207081
chr17 38490494 38490498 YY1 TRANSFAC yes 21234497
chr17 38490494 38490498 YY1 TRANSFAC yes 54207082
chr17 38490512 38490533 ZNF263 JASPAR yes 21234498
chr17 38490512 38490533 ZNF263 JASPAR yes 54207083
chr17 38490514 38490528 SPI1 JASPAR yes 21234499
chr17 38490514 38490528 SPIC JASPAR yes 21234500
chr17 38490514 38490528 SPI1 JASPAR yes 54207084
chr17 38490514 38490528 SPIC JASPAR yes 54207085
chr17 38490535 38490546 CEBPA JASPAR yes 21234501
chr17 38490535 38490546 CEBPA JASPAR yes 54207086
chr17 38490535 38490547 HLF JASPAR yes 21234502
chr17 38490535 38490547 HLF JASPAR yes 54207087
chr17 38490545 38490557 INSM1 JASPAR yes 21234503
chr17 38490545 38490557 INSM1 JASPAR yes 54207088
chr17 38490545 38490562 RARA JASPAR yes 21234504
chr17 38490545 38490562 RXRA JASPAR yes 21234505
chr17 38490545 38490562 RARA JASPAR yes 54207089
chr17 38490545 38490562 RXRA JASPAR yes 54207090
chr17 38490545 38490566 ZNF263 JASPAR yes 21234506
chr17 38490545 38490566 ZNF263 JASPAR yes 54207091
chr17 38490548 38490559 FLI1 JASPAR yes 21234507
chr17 38490548 38490559 FLI1 JASPAR yes 54207092
chr17 38490548 38490569 ZNF263 JASPAR yes 21234508
chr17 38490548 38490569 ZNF263 JASPAR yes 54207093
chr17 38490550 38490558 EHF JASPAR yes 21234509
chr17 38490550 38490558 EHF JASPAR yes 54207094
chr17 38490555 38490561 NFE2 TRANSFAC yes 21234510
chr17 38490555 38490561 NFE2 TRANSFAC yes 54207095
chr17 38490559 38490565 SP1 TRANSFAC yes 21234511
chr17 38490559 38490565 SP1 TRANSFAC yes 54207096
chr17 38490559 38490569 SP1 JASPAR yes 21234512
chr17 38490559 38490569 SP1 JASPAR yes 54207097
chr17 38490559 38490574 ZIC3 JASPAR yes 21234513
chr17 38490559 38490574 ZIC3 JASPAR yes 54207098
chr17 38490571 38490592 IRF1 JASPAR yes 21234514
chr17 38490571 38490592 IRF1 JASPAR yes 54207099
chr17 38490575 38490587 IRF1 JASPAR yes 21234515
chr17 38490575 38490587 IRF1 JASPAR yes 54207100
chr17 38490575 38490590 IRF9 JASPAR yes 21234516
chr17 38490575 38490590 IRF9 JASPAR yes 54207101
chr17 38490577 38490597 PPARG JASPAR yes 21234517
chr17 38490577 38490597 PPARG JASPAR yes 54207102
chr17 38490584 38490605 ZNF263 JASPAR yes 21234518
chr17 38490584 38490605 ZNF263 JASPAR yes 54207103
chr17 38490585 38490595 SP1 JASPAR yes 21234519
chr17 38490585 38490595 SP1 JASPAR yes 54207104
chr17 38490588 38490594 NFE2 TRANSFAC yes 21234520
chr17 38490588 38490594 NFE2 TRANSFAC yes 54207105
chr17 38490591 38490597 SP1 TRANSFAC yes 21234521
chr17 38490591 38490597 SP1 TRANSFAC yes 54207106
chr17 38490591 38490601 SP1 JASPAR yes 21234522
chr17 38490591 38490601 SP1 TRANSFAC yes 21234523
chr17 38490591 38490601 SP1 JASPAR yes 54207107
chr17 38490591 38490601 SP1 TRANSFAC yes 54207108
chr17 38490596 38490606 SP1 JASPAR yes 21234524
chr17 38490596 38490606 SP1 JASPAR yes 54207109
chr17 38490603 38490617 FOXF2 JASPAR yes 21234525
chr17 38490603 38490617 FOXF2 JASPAR yes 54207110
chr17 38490603 38490618 FOXP1 JASPAR yes 21234526
chr17 38490603 38490618 FOXP1 JASPAR yes 54207111
chr17 38490604 38490614 HMBOX1 JASPAR yes 21234527
chr17 38490604 38490614 HMBOX1 JASPAR yes 54207112
chr17 38490606 38490617 FOXP2 JASPAR yes 21234528
chr17 38490606 38490617 FOXP2 JASPAR yes 54207113
chr17 38490608 38490615 FOXD2 JASPAR yes 21234529
chr17 38490608 38490615 FOXI1 JASPAR yes 21234530
chr17 38490608 38490615 FOXL1 JASPAR yes 21234531
chr17 38490608 38490615 FOXO4 JASPAR yes 21234532
chr17 38490608 38490615 FOXO6 JASPAR yes 21234533
chr17 38490608 38490615 FOXP3 JASPAR yes 21234534
chr17 38490608 38490615 FOXD2 JASPAR yes 54207114
chr17 38490608 38490615 FOXI1 JASPAR yes 54207115
chr17 38490608 38490615 FOXL1 JASPAR yes 54207116
chr17 38490608 38490615 FOXO4 JASPAR yes 54207117
chr17 38490608 38490615 FOXO6 JASPAR yes 54207118
chr17 38490608 38490615 FOXP3 JASPAR yes 54207119
chr17 38490608 38490616 FOXD1 JASPAR yes 21234535
chr17 38490608 38490616 FOXG1 JASPAR yes 21234536
chr17 38490608 38490616 FOXO3 JASPAR yes 21234537
chr17 38490608 38490616 FOXD1 JASPAR yes 54207120
chr17 38490608 38490616 FOXG1 JASPAR yes 54207121
chr17 38490608 38490616 FOXO3 JASPAR yes 54207122
chr17 38490631 38490640 THAP1 JASPAR yes 21234538
chr17 38490631 38490640 THAP1 JASPAR yes 54207123
chr17 38490657 38490678 ZNF263 JASPAR yes 21234539
chr17 38490657 38490678 ZNF263 JASPAR yes 54207124
chr17 38490662 38490670 NR4A2 JASPAR yes 21234540
chr17 38490662 38490670 NR4A2 JASPAR yes 54207125
chr17 38490665 38490679 SPI1 JASPAR yes 21234541
chr17 38490665 38490679 SPI1 JASPAR yes 54207126
chr17 38490666 38490674 EHF JASPAR yes 21234542
chr17 38490666 38490674 EHF JASPAR yes 54207127
chr17 38490668 38490675 SPIB JASPAR yes 21234543
chr17 38490668 38490675 SPIB JASPAR yes 54207128
chr17 38490686 38490694 TBX5 JASPAR yes 21234544
chr17 38490686 38490694 TBX5 JASPAR yes 54207129
chr17 38490687 38490702 RFX5 JASPAR yes 21234545
chr17 38490687 38490702 RFX5 JASPAR yes 54207130
chr17 38490687 38490706 REST JASPAR yes 21234546
chr17 38490687 38490706 REST JASPAR yes 54207131
chr17 38490717 38490728 E2F6 JASPAR yes 21234547
chr17 38490717 38490728 E2F6 JASPAR yes 54207132
SNP sites on vista24708[chr17:38490291-38490758]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38490340 rs547773456 G A,C
NR3C1 SP1
4866296
chr17 38490520 rs371950150 C T
SPI1 SPIC ZNF263
4866297
chr17 38490535 rs60048921 A G
CEBPA HLF
4866298
chr17 38490674 rs182862420 C T
EHF SPI1 SPIB ZNF263
4866299
Genes possibly regulated by vista24708[chr17:38490291-38490758]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38443885 38459171 + CDC6 ENSG00000094804.5 38443885 0.9 0.99 15763 53594
chr17 38465444 38513094 + RARA ENSG00000131759.13 38465444 0.75 1.0 15764 75153
chr17 38516907 38520945 + CTD-2267D19.3 ENSG00000266208.1 38516907 0.82 0.99 15765 73851
chr17 38517235 38520067 - GJD3 ENSG00000183153.5 38520067 0.97 1.0 15766 70691
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 16556
Expression level of Genes
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miRNAs possibly regulated by vista24708[chr17:38490291-38490758]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results