EnhancerDB
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Enhancers that have rs547773456[chr17:38490340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38486105 38510075 enh60669
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Stomach
chr17 38490291 38490758 vista24708
VISTA
Transcript factors that have rs547773456[chr17:38490340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38489772 38490434 TCF7L2 GTRD no Colon (HCT116) 21753772
chr17 38489772 38490434 TCF7L2 GTRD no Colon (HCT116) 108254729
chr17 38489981 38490346 TCF7L2 GTRD no Colon (HCT116) 21753773
chr17 38489981 38490346 TCF7L2 GTRD no Colon (HCT116) 108254730
chr17 38490114 38490446 TCF7L2 GTRD no Colon (HCT116) 21753774
chr17 38490114 38490446 TCF7L2 GTRD no Colon (HCT116) 108254731
chr17 38490127 38490411 NR3C1 UCSC Txn Factor no Conserved 108254732
chr17 38490127 38490411 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108254733
chr17 38490330 38490340 SP1 JASPAR yes 21234468
chr17 38490330 38490340 SP1 JASPAR yes 54207053
chr17 38490337 38490342 SP1 TRANSFAC yes 21234469
chr17 38490337 38490342 SP1 TRANSFAC yes 54207054
Genes associated with rs547773456[chr17:38490340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More