EnhancerDB
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  3. vista24729[chr17:38680852-38681157]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24729[chr17:38680852-38681157]
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Tissue distribution of vista24729
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Transcription factor that possibly regulate vista24729[chr17:38680852-38681157]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38680838 38680853 FOXA1 JASPAR yes 21235478
chr17 38680838 38680853 FOXA1 JASPAR yes 54221393
chr17 38680840 38680852 FOXC2 JASPAR yes 21235479
chr17 38680840 38680852 FOXC2 JASPAR yes 54221394
chr17 38680841 38680852 FOXC1 JASPAR yes 21235480
chr17 38680841 38680852 FOXC1 JASPAR yes 54221395
chr17 38680842 38680853 FOXA1 JASPAR yes 21235481
chr17 38680842 38680853 FOXA1 JASPAR yes 54221396
chr17 38680848 38680854 SOX10 JASPAR yes 21235482
chr17 38680848 38680854 SOX10 JASPAR yes 54221397
chr17 38680851 38680872 ZNF263 JASPAR yes 21235483
chr17 38680851 38680872 ZNF263 JASPAR yes 54221398
chr17 38680852 38680863 YY2 JASPAR yes 21235484
chr17 38680852 38680863 YY2 JASPAR yes 54221399
chr17 38680854 38680875 ZNF263 JASPAR yes 21235485
chr17 38680854 38680875 ZNF263 JASPAR yes 54221400
chr17 38680858 38680862 YY1 TRANSFAC yes 21235486
chr17 38680858 38680862 YY1 TRANSFAC yes 54221401
chr17 38680865 38680875 SP1 JASPAR yes 21235487
chr17 38680865 38680875 SP1 JASPAR yes 54221402
chr17 38680866 38680880 SPI1 JASPAR yes 21235488
chr17 38680866 38680880 SPI1 JASPAR yes 54221403
chr17 38680866 38680883 ZNF410 JASPAR yes 21235489
chr17 38680866 38680883 ZNF410 JASPAR yes 54221404
chr17 38680867 38680888 ZNF263 JASPAR yes 21235490
chr17 38680867 38680888 ZNF263 JASPAR yes 54221405
chr17 38680882 38680899 BCL6B JASPAR yes 21235491
chr17 38680882 38680899 BCL6B JASPAR yes 54221406
chr17 38680887 38680898 PHOX2A JASPAR yes 21235492
chr17 38680887 38680898 PROP1 JASPAR yes 21235493
chr17 38680887 38680898 PHOX2A JASPAR yes 54221407
chr17 38680887 38680898 PROP1 JASPAR yes 54221408
chr17 38680892 38680903 PHOX2A JASPAR yes 21235494
chr17 38680892 38680903 PROP1 JASPAR yes 21235495
chr17 38680892 38680903 PHOX2A JASPAR yes 54221409
chr17 38680892 38680903 PROP1 JASPAR yes 54221410
chr17 38680917 38680922 GATA2 JASPAR yes 21235496
chr17 38680917 38680922 GATA2 JASPAR yes 54221411
chr17 38680943 38680958 LEF1 JASPAR yes 21235497
chr17 38680943 38680958 LEF1 JASPAR yes 54221412
chr17 38680947 38680963 SOX8 JASPAR yes 21235498
chr17 38680947 38680963 SOX8 JASPAR yes 54221413
chr17 38680948 38680954 SOX10 JASPAR yes 21235499
chr17 38680948 38680954 SOX10 JASPAR yes 54221414
chr17 38680956 38680974 ESR2 JASPAR yes 21235500
chr17 38680956 38680974 ESR2 JASPAR yes 54221415
chr17 38680969 38680973 YY1 TRANSFAC yes 21235501
chr17 38680969 38680973 YY1 TRANSFAC yes 54221416
chr17 38680997 38681011 CREB3L1 JASPAR yes 21235502
chr17 38680997 38681011 CREB3L1 JASPAR yes 54221417
chr17 38681005 38681013 FOXO3 JASPAR yes 21235503
chr17 38681005 38681013 FOXO3 JASPAR yes 54221418
chr17 38681010 38681016 SOX10 JASPAR yes 21235504
chr17 38681010 38681016 SOX10 JASPAR yes 54221419
chr17 38681035 38681040 GATA2 JASPAR yes 21235505
chr17 38681035 38681040 GATA2 JASPAR yes 54221420
chr17 38681050 38681065 STAT1 JASPAR yes 21235506
chr17 38681050 38681065 STAT1 JASPAR yes 54221421
chr17 38681052 38681063 STAT1 JASPAR yes 21235507
chr17 38681052 38681063 STAT3 JASPAR yes 21235508
chr17 38681052 38681063 STAT1 JASPAR yes 54221422
chr17 38681052 38681063 STAT3 JASPAR yes 54221423
chr17 38681078 38681094 POU4F2 JASPAR yes 21235509
chr17 38681078 38681094 POU4F3 JASPAR yes 21235510
chr17 38681078 38681094 POU4F2 JASPAR yes 54221424
chr17 38681078 38681094 POU4F3 JASPAR yes 54221425
chr17 38681080 38681094 POU4F1 JASPAR yes 21235511
chr17 38681080 38681094 POU4F1 JASPAR yes 54221426
chr17 38681081 38681093 HNF1B JASPAR yes 21235512
chr17 38681081 38681093 HNF1B JASPAR yes 54221427
chr17 38681115 38681119 YY1 TRANSFAC yes 21235513
chr17 38681115 38681119 YY1 TRANSFAC yes 54221428
chr17 38681150 38681164 GATA2 JASPAR yes 21235514
chr17 38681150 38681164 GATA2 JASPAR yes 54221429
chr17 38681152 38681160 GATA3 JASPAR yes 21235515
chr17 38681152 38681160 GATA3 JASPAR yes 54221430
chr17 38681154 38681175 IRF1 JASPAR yes 21235516
chr17 38681154 38681175 IRF1 JASPAR yes 54221431
chr17 38681156 38681171 IRF9 JASPAR yes 21235517
chr17 38681156 38681171 IRF9 JASPAR yes 54221432
chr17 38681157 38681171 IRF7 JASPAR yes 21235518
chr17 38681157 38681171 IRF7 JASPAR yes 54221433
SNP sites on vista24729[chr17:38680852-38681157]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38680924 rs117189350 C A no 4867867
chr17 38680959 rs80220043 T C
ESR2 SOX8
4867868
chr17 38681117 rs191093932 A G
YY1
4867869
chr17 38681128 rs72819668 C G no 4867870
Genes possibly regulated by vista24729[chr17:38680852-38681157]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 18850
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 76997
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 59433
Expression level of Genes
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miRNAs possibly regulated by vista24729[chr17:38680852-38681157]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results