EnhancerDB
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  3. rs80220043[chr17:38680959]
Enhancers that have rs80220043[chr17:38680959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38680852 38681157 vista24729
VISTA
Transcript factors that have rs80220043[chr17:38680959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38680427 38680960 ZNF274 GTRD no Blood (GM12878) 21754968
chr17 38680427 38680960 ZNF274 GTRD no Blood (GM12878) 108255564
chr17 38680881 38681171 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754970
chr17 38680881 38681171 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108255565
chr17 38680882 38681249 ZNF274 GTRD no Bone Marrow (K562) 21754971
chr17 38680882 38681249 ZNF274 GTRD no Bone Marrow (K562) 108255566
chr17 38680915 38681195 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21754972
chr17 38680915 38681195 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108255567
chr17 38680947 38680963 SOX8 JASPAR yes 21235498
chr17 38680947 38680963 SOX8 JASPAR yes 54221413
chr17 38680956 38680974 ESR2 JASPAR yes 21235500
chr17 38680956 38680974 ESR2 JASPAR yes 54221415
chr17 38680957 38681384 ZNF274 GTRD no Blood (GM12878) 21754973
chr17 38680957 38681384 ZNF274 GTRD no Blood (GM12878) 108255568
Genes associated with rs80220043[chr17:38680959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More