EnhancerDB
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  3. vista24733[chr17:38699205-38699580]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24733[chr17:38699205-38699580]
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Tissue distribution of vista24733
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Transcription factor that possibly regulate vista24733[chr17:38699205-38699580]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38698584 38699566 EP300 UCSC Txn Factor no Conserved 108255735
chr17 38698592 38699483 TCF12 UCSC Txn Factor no Conserved 108255737
chr17 38698767 38699378 NR3C1 UCSC Txn Factor no Conserved 108255741
chr17 38698942 38699446 BCL3 UCSC Txn Factor no Conserved 108255759
chr17 38698969 38699220 CEBPB UCSC Txn Factor no Conserved 108255764
chr17 38698983 38699440 FOSL2 UCSC Txn Factor no Conserved 108255768
chr17 38699391 38699643 USF1 UCSC Txn Factor no Conserved 108255808
chr17 38699205 38699223 E2F3 JASPAR yes 21235638
chr17 38699205 38699223 E2F3 JASPAR yes 54224183
chr17 38699211 38699216 SP1 TRANSFAC yes 21235639
chr17 38699211 38699216 SP1 TRANSFAC yes 54224184
chr17 38699236 38699246 MSC JASPAR yes 21235640
chr17 38699236 38699246 MYF6 JASPAR yes 21235641
chr17 38699236 38699246 MSC JASPAR yes 54224185
chr17 38699236 38699246 MYF6 JASPAR yes 54224186
chr17 38699254 38699259 SP1 TRANSFAC yes 21235642
chr17 38699254 38699259 SP1 TRANSFAC yes 54224187
chr17 38699259 38699263 NFE TRANSFAC yes 21235643
chr17 38699259 38699263 NFE TRANSFAC yes 54224188
chr17 38699259 38699279 TP63 JASPAR yes 21235644
chr17 38699259 38699279 TP63 JASPAR yes 54224189
chr17 38699260 38699278 TP53 JASPAR yes 21235645
chr17 38699260 38699278 TP53 JASPAR yes 54224190
chr17 38699261 38699281 TP53 JASPAR yes 21235646
chr17 38699261 38699281 TP53 JASPAR yes 54224191
chr17 38699262 38699277 TP53 JASPAR yes 21235647
chr17 38699262 38699277 TP53 JASPAR yes 54224192
chr17 38699266 38699275 HIC2 JASPAR yes 21235648
chr17 38699266 38699275 HIC2 JASPAR yes 54224193
chr17 38699267 38699287 TP53 JASPAR yes 21235649
chr17 38699267 38699287 TP53 JASPAR yes 54224194
chr17 38699269 38699273 LFA1 TRANSFAC yes 21235650
chr17 38699269 38699273 LFA1 TRANSFAC yes 54224195
chr17 38699312 38699323 BATF JASPAR yes 21235651
chr17 38699312 38699323 BATF JASPAR yes 54224196
chr17 38699315 38699324 JDP2 JASPAR yes 21235652
chr17 38699315 38699324 JDP2 JASPAR yes 54224197
chr17 38699330 38699335 ETS2 TRANSFAC yes 21235653
chr17 38699330 38699335 ETS2 TRANSFAC yes 54224198
chr17 38699343 38699354 YY2 JASPAR yes 21235654
chr17 38699343 38699354 YY2 JASPAR yes 54224199
chr17 38699359 38699363 YY1 TRANSFAC yes 21235655
chr17 38699359 38699363 YY1 TRANSFAC yes 54224200
chr17 38699363 38699383 TP53 JASPAR yes 21235656
chr17 38699363 38699383 TP53 JASPAR yes 54224201
chr17 38699369 38699389 TP53 JASPAR yes 21235657
chr17 38699369 38699389 TP53 JASPAR yes 54224202
chr17 38699374 38699389 TP53 JASPAR yes 21235658
chr17 38699374 38699389 TP53 JASPAR yes 54224203
chr17 38699390 38699403 SMAD2 JASPAR yes 21235659
chr17 38699390 38699403 SMAD2 JASPAR yes 54224204
chr17 38699409 38699424 NFYB JASPAR yes 21235660
chr17 38699409 38699424 NFYB JASPAR yes 54224205
chr17 38699411 38699427 NFYA JASPAR yes 21235661
chr17 38699411 38699427 NFYA JASPAR yes 54224206
chr17 38699412 38699430 NFYA JASPAR yes 21235662
chr17 38699412 38699430 NFYA JASPAR yes 54224207
chr17 38699416 38699420 H1TF2 TRANSFAC yes 21235663
chr17 38699416 38699420 NFE TRANSFAC yes 21235664
chr17 38699416 38699420 SRF TRANSFAC yes 21235665
chr17 38699416 38699420 H1TF2 TRANSFAC yes 54224208
chr17 38699416 38699420 NFE TRANSFAC yes 54224209
chr17 38699416 38699420 SRF TRANSFAC yes 54224210
chr17 38699449 38699454 SP1 TRANSFAC yes 21235666
chr17 38699449 38699454 SP1 TRANSFAC yes 54224211
chr17 38699464 38699472 EHF JASPAR yes 21235667
chr17 38699464 38699472 EHF JASPAR yes 54224212
chr17 38699483 38699487 ESR1 TRANSFAC yes 21235668
chr17 38699483 38699487 ESR1 TRANSFAC yes 54224213
chr17 38699490 38699505 NR2C2 JASPAR yes 21235669
chr17 38699490 38699505 NR2C2 JASPAR yes 54224214
chr17 38699492 38699506 PLAG1 JASPAR yes 21235670
chr17 38699492 38699506 PLAG1 JASPAR yes 54224215
chr17 38699493 38699497 LFA1 TRANSFAC yes 21235671
chr17 38699493 38699497 LFA1 TRANSFAC yes 54224216
chr17 38699501 38699506 TFAP2A TRANSFAC yes 21235672
chr17 38699501 38699506 TFAP2A TRANSFAC yes 54224217
chr17 38699501 38699507 MZF1 JASPAR yes 21235673
chr17 38699501 38699507 MZF1 JASPAR yes 54224218
chr17 38699516 38699526 MAX JASPAR yes 21235674
chr17 38699516 38699526 MAX JASPAR yes 54224219
chr17 38699516 38699527 USF1 JASPAR yes 21235675
chr17 38699516 38699527 USF2 JASPAR yes 21235676
chr17 38699516 38699527 USF1 JASPAR yes 54224220
chr17 38699516 38699527 USF2 JASPAR yes 54224221
chr17 38699517 38699527 BHLHE40 JASPAR yes 21235677
chr17 38699517 38699527 BHLHE41 JASPAR yes 21235678
chr17 38699517 38699527 MAX JASPAR yes 21235679
chr17 38699517 38699527 MLXIPL JASPAR yes 21235680
chr17 38699517 38699527 MLX JASPAR yes 21235681
chr17 38699517 38699527 MNT JASPAR yes 21235682
chr17 38699517 38699527 SREBF2 JASPAR yes 21235683
chr17 38699517 38699527 TFE3 JASPAR yes 21235684
chr17 38699517 38699527 TFEB JASPAR yes 21235685
chr17 38699517 38699527 TFEC JASPAR yes 21235686
chr17 38699517 38699527 BHLHE40 JASPAR yes 54224222
chr17 38699517 38699527 BHLHE41 JASPAR yes 54224223
chr17 38699517 38699527 MAX JASPAR yes 54224224
chr17 38699517 38699527 MLXIPL JASPAR yes 54224225
chr17 38699517 38699527 MLX JASPAR yes 54224226
chr17 38699517 38699527 MNT JASPAR yes 54224227
chr17 38699517 38699527 SREBF2 JASPAR yes 54224228
chr17 38699517 38699527 TFE3 JASPAR yes 54224229
chr17 38699517 38699527 TFEB JASPAR yes 54224230
chr17 38699517 38699527 TFEC JASPAR yes 54224231
chr17 38699517 38699528 USF1 JASPAR yes 21235687
chr17 38699517 38699528 USF2 JASPAR yes 21235688
chr17 38699517 38699528 USF1 JASPAR yes 54224232
chr17 38699517 38699528 USF2 JASPAR yes 54224233
chr17 38699518 38699525 USF1 JASPAR yes 21235689
chr17 38699518 38699525 USF1 JASPAR yes 54224234
chr17 38699519 38699524 MYC TRANSFAC yes 21235690
chr17 38699519 38699524 USF1 TRANSFAC yes 21235691
chr17 38699519 38699524 USF2 TRANSFAC yes 21235692
chr17 38699519 38699524 MYC TRANSFAC yes 54224235
chr17 38699519 38699524 USF1 TRANSFAC yes 54224236
chr17 38699519 38699524 USF2 TRANSFAC yes 54224237
chr17 38699520 38699534 CREB3L1 JASPAR yes 21235693
chr17 38699520 38699534 CREB3L1 JASPAR yes 54224238
chr17 38699523 38699528 ATF1 TRANSFAC yes 21235694
chr17 38699523 38699528 ATF1 TRANSFAC yes 54224239
chr17 38699569 38699572 MYB TRANSFAC yes 21235695
chr17 38699569 38699572 MYB TRANSFAC yes 54224240
SNP sites on vista24733[chr17:38699205-38699580]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38699287 rs149679659 G A
BCL3 EP300 FOSL2 NR3C1 TCF12 TP53
4868073
chr17 38699347 rs79469626 C T
BCL3 EP300 FOSL2 NR3C1 TCF12 YY2
4868074
chr17 38699371 rs76705448 C T
BCL3 EP300 FOSL2 NR3C1 TCF12 TP53
4868075
chr17 38699439 rs531415190 C A
BCL3 EP300 FOSL2 TCF12 USF1
4868076
chr17 38699565 rs116416561 C T
EP300 USF1
4868077
Genes possibly regulated by vista24733[chr17:38699205-38699580]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 497
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 58644
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 77856
Expression level of Genes
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miRNAs possibly regulated by vista24733[chr17:38699205-38699580]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results