EnhancerDB
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  3. rs116416561[chr17:38699565]
Enhancers that have rs116416561[chr17:38699565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38699205 38699580 vista24733
VISTA
Transcript factors that have rs116416561[chr17:38699565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38698584 38699566 EP300 UCSC Txn Factor no Conserved 108255735
chr17 38698584 38699566 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255736
chr17 38698729 38699962 ZNF274 GTRD no Liver (HepG2) 21755248
chr17 38698729 38699962 ZNF274 GTRD no Liver (HepG2) 108255739
chr17 38698740 38699897 ZNF274 GTRD no Liver (HepG2) 21755249
chr17 38698740 38699897 ZNF274 GTRD no Liver (HepG2) 108255740
chr17 38698820 38699817 ZNF274 GTRD no Liver (HepG2) 21755252
chr17 38698820 38699817 ZNF274 GTRD no Liver (HepG2) 108255745
chr17 38698826 38699642 ZNF274 GTRD no Liver (HepG2) 21755253
chr17 38698826 38699642 ZNF274 GTRD no Liver (HepG2) 108255746
chr17 38698829 38699836 ZNF274 GTRD no Blood (GM12878) 21755255
chr17 38698829 38699836 ZNF274 GTRD no Blood (GM12878) 108255747
chr17 38698833 38699735 ZNF274 GTRD no Liver (HepG2) 21755256
chr17 38698833 38699735 ZNF274 GTRD no Liver (HepG2) 108255748
chr17 38698835 38699752 ZNF274 GTRD no Liver (HepG2) 21755257
chr17 38698835 38699752 ZNF274 GTRD no Liver (HepG2) 108255749
chr17 38698845 38699755 ZNF274 GTRD no Liver (HepG2) 21755259
chr17 38698845 38699755 ZNF274 GTRD no Liver (HepG2) 108255751
chr17 38698869 38699747 ZBTB33 GTRD no Lung (A549) 108255753
chr17 38698973 38700029 ZBTB33 GTRD no Lung (A549) 108255767
chr17 38698988 38699584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755270
chr17 38698988 38699584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255770
chr17 38699000 38699737 ZNF274 GTRD no Liver (HepG2) 21755274
chr17 38699000 38699737 ZNF274 GTRD no Liver (HepG2) 108255775
chr17 38699038 38699735 ZNF274 GTRD no Liver (HepG2) 21755277
chr17 38699038 38699735 ZNF274 GTRD no Liver (HepG2) 108255776
chr17 38699060 38699752 ZNF274 GTRD no Liver (HepG2) 21755280
chr17 38699060 38699752 ZNF274 GTRD no Liver (HepG2) 108255779
chr17 38699067 38699616 ZNF274 GTRD no Bone Marrow (K562) 21755281
chr17 38699067 38699616 ZNF274 GTRD no Bone Marrow (K562) 108255780
chr17 38699097 38699722 ZNF274 GTRD no Bone Marrow (K562) 21755285
chr17 38699097 38699722 ZNF274 GTRD no Bone Marrow (K562) 108255785
chr17 38699126 38699617 ZNF274 GTRD no Liver (HepG2) 21755286
chr17 38699126 38699617 ZNF274 GTRD no Liver (HepG2) 108255787
chr17 38699130 38699815 ZNF274 GTRD no Liver (HepG2) 21755287
chr17 38699130 38699815 ZNF274 GTRD no Liver (HepG2) 108255788
chr17 38699144 38699814 ZNF274 GTRD no Liver (HepG2) 21755288
chr17 38699144 38699814 ZNF274 GTRD no Liver (HepG2) 108255789
chr17 38699145 38699738 ZNF274 GTRD no Liver (HepG2) 21755289
chr17 38699145 38699738 ZNF274 GTRD no Liver (HepG2) 108255790
chr17 38699165 38699790 ZNF274 GTRD no Liver (HepG2) 21755290
chr17 38699165 38699790 ZNF274 GTRD no Liver (HepG2) 108255791
chr17 38699186 38699706 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755291
chr17 38699186 38699706 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255792
chr17 38699209 38699804 ZNF274 GTRD no Bone Marrow (K562) 21755293
chr17 38699209 38699804 ZNF274 GTRD no Bone Marrow (K562) 108255794
chr17 38699211 38699636 ZNF274 GTRD no Cervix (HeLa-S3) 21755294
chr17 38699211 38699636 ZNF274 GTRD no Cervix (HeLa-S3) 108255795
chr17 38699215 38699636 ZNF274 GTRD no Bone Marrow (K562) 21755295
chr17 38699215 38699636 ZNF274 GTRD no Bone Marrow (K562) 108255796
chr17 38699218 38699781 ZNF274 GTRD no Liver (HepG2) 21755296
chr17 38699218 38699781 ZNF274 GTRD no Liver (HepG2) 108255797
chr17 38699230 38699610 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755297
chr17 38699230 38699610 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255798
chr17 38699252 38699590 ZNF274 GTRD no Bone Marrow (K562) 21755298
chr17 38699252 38699590 ZNF274 GTRD no Bone Marrow (K562) 108255799
chr17 38699260 38699567 ZNF274 GTRD no Bone Marrow (K562) 21755299
chr17 38699260 38699567 ZNF274 GTRD no Bone Marrow (K562) 108255800
chr17 38699262 38699582 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755300
chr17 38699262 38699582 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255801
chr17 38699265 38699817 ZNF274 GTRD no Liver (HepG2) 21755301
chr17 38699265 38699817 ZNF274 GTRD no Liver (HepG2) 108255802
chr17 38699281 38699760 ZNF274 GTRD no Cervix (HeLa-S3) 21755303
chr17 38699281 38699760 ZNF274 GTRD no Cervix (HeLa-S3) 108255804
chr17 38699329 38699602 ZNF274 GTRD no Bone Marrow (K562) 21755304
chr17 38699329 38699602 ZNF274 GTRD no Bone Marrow (K562) 108255805
chr17 38699366 38699716 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255806
chr17 38699378 38699602 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755305
chr17 38699378 38699602 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255807
chr17 38699391 38699643 USF1 UCSC Txn Factor no Conserved 108255808
chr17 38699391 38699655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21755306
chr17 38699391 38699655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108255809
chr17 38699394 38699670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755307
chr17 38699394 38699670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255810
chr17 38699406 38699643 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108255811
chr17 38699453 38699624 ZNF274 GTRD no Liver (HepG2) 21755309
chr17 38699453 38699624 ZNF274 GTRD no Liver (HepG2) 108255813
chr17 38699458 38699606 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21755310
chr17 38699458 38699606 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108255814
chr17 38699467 38699597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21755311
chr17 38699467 38699597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108255815
Genes associated with rs116416561[chr17:38699565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More