EnhancerDB
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  3. vista24739[chr17:38713026-38713386]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24739[chr17:38713026-38713386]
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Tissue distribution of vista24739
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Transcription factor that possibly regulate vista24739[chr17:38713026-38713386]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38713087 38713637 GATA2 UCSC Txn Factor no Conserved 108256707
chr17 38713314 38713486 TEAD4 UCSC Txn Factor no Conserved 108256725
chr17 38713012 38713026 E2F7 JASPAR yes 21236155
chr17 38713012 38713026 E2F7 JASPAR yes 54226076
chr17 38713014 38713026 E2F8 JASPAR yes 21236156
chr17 38713014 38713026 E2F8 JASPAR yes 54226079
chr17 38713019 38713030 NFKB1 JASPAR yes 21236157
chr17 38713019 38713030 NFKB1 JASPAR yes 54226080
chr17 38713020 38713030 RELA JASPAR yes 21236158
chr17 38713020 38713030 REL JASPAR yes 21236159
chr17 38713020 38713030 RELA JASPAR yes 54226081
chr17 38713020 38713030 REL JASPAR yes 54226082
chr17 38713025 38713031 ZNF354C JASPAR yes 21236160
chr17 38713025 38713031 ZNF354C JASPAR yes 54226083
chr17 38713026 38713036 FIGLA JASPAR yes 21236161
chr17 38713026 38713036 FIGLA JASPAR yes 54226084
chr17 38713028 38713033 USF2 TRANSFAC yes 21236162
chr17 38713028 38713033 USF2 TRANSFAC yes 54226085
chr17 38713033 38713047 PLAG1 JASPAR yes 21236163
chr17 38713033 38713047 PLAG1 JASPAR yes 54226086
chr17 38713033 38713048 NR2C2 JASPAR yes 21236164
chr17 38713033 38713048 NR2C2 JASPAR yes 54226087
chr17 38713033 38713054 ZNF263 JASPAR yes 21236165
chr17 38713033 38713054 ZNF263 JASPAR yes 54226088
chr17 38713034 38713048 RXRB JASPAR yes 21236166
chr17 38713034 38713048 RXRG JASPAR yes 21236167
chr17 38713034 38713048 RXRB JASPAR yes 54226089
chr17 38713034 38713048 RXRG JASPAR yes 54226090
chr17 38713036 38713040 ESR1 TRANSFAC yes 21236168
chr17 38713036 38713040 ESR1 TRANSFAC yes 54226091
chr17 38713045 38713066 ZNF263 JASPAR yes 21236169
chr17 38713045 38713066 ZNF263 JASPAR yes 54226092
chr17 38713046 38713053 CEBPA TRANSFAC yes 21236170
chr17 38713046 38713053 CEBPA TRANSFAC yes 54226093
chr17 38713057 38713078 ZNF263 JASPAR yes 21236171
chr17 38713057 38713078 ZNF263 JASPAR yes 54226094
chr17 38713068 38713075 SPIB JASPAR yes 21236172
chr17 38713068 38713075 SPIB JASPAR yes 54226095
chr17 38713069 38713077 EHF JASPAR yes 21236173
chr17 38713069 38713077 EHF JASPAR yes 54226096
chr17 38713082 38713094 YY1 JASPAR yes 21236174
chr17 38713082 38713094 YY1 JASPAR yes 54226097
chr17 38713087 38713091 YY1 TRANSFAC yes 21236175
chr17 38713087 38713091 YY1 TRANSFAC yes 54226098
chr17 38713098 38713110 PROX1 JASPAR yes 21236176
chr17 38713098 38713110 PROX1 JASPAR yes 54226099
chr17 38713116 38713120 LFA1 TRANSFAC yes 21236177
chr17 38713116 38713120 LFA1 TRANSFAC yes 54226100
chr17 38713140 38713145 SP1 TRANSFAC yes 21236178
chr17 38713140 38713145 SP1 TRANSFAC yes 54226101
chr17 38713144 38713155 ESRRA JASPAR yes 21236179
chr17 38713144 38713155 ESRRA JASPAR yes 54226102
chr17 38713171 38713175 H4TF2 TRANSFAC yes 21236180
chr17 38713171 38713175 H4TF2 TRANSFAC yes 54226103
chr17 38713175 38713189 PLAG1 JASPAR yes 21236181
chr17 38713175 38713189 PLAG1 JASPAR yes 54226104
chr17 38713186 38713200 ZIC1 JASPAR yes 21236182
chr17 38713186 38713200 ZIC1 JASPAR yes 54226105
chr17 38713217 38713228 CDX2 JASPAR yes 21236183
chr17 38713217 38713228 CDX2 JASPAR yes 54226106
chr17 38713219 38713228 CDX1 JASPAR yes 21236184
chr17 38713219 38713228 CDX1 JASPAR yes 54226107
chr17 38713233 38713249 ZNF143 JASPAR yes 21236185
chr17 38713233 38713249 ZNF143 JASPAR yes 54226108
chr17 38713248 38713258 GCM2 JASPAR yes 21236186
chr17 38713248 38713258 GCM2 JASPAR yes 54226109
chr17 38713249 38713259 ZNF740 JASPAR yes 21236187
chr17 38713249 38713259 ZNF740 JASPAR yes 54226110
chr17 38713251 38713261 SP1 JASPAR yes 21236188
chr17 38713251 38713261 SP1 JASPAR yes 54226111
chr17 38713254 38713259 SP1 TRANSFAC yes 21236189
chr17 38713254 38713259 SP1 TRANSFAC yes 54226112
chr17 38713273 38713285 NHLH1 JASPAR yes 21236190
chr17 38713273 38713285 NHLH1 JASPAR yes 54226113
chr17 38713274 38713284 MSC JASPAR yes 21236191
chr17 38713274 38713284 NHLH1 JASPAR yes 21236192
chr17 38713274 38713284 TFAP4 JASPAR yes 21236193
chr17 38713274 38713284 MSC JASPAR yes 54226114
chr17 38713274 38713284 NHLH1 JASPAR yes 54226115
chr17 38713274 38713284 TFAP4 JASPAR yes 54226116
chr17 38713280 38713297 BCL6B JASPAR yes 21236194
chr17 38713280 38713297 BCL6B JASPAR yes 54226117
chr17 38713290 38713301 FLI1 JASPAR yes 21236195
chr17 38713290 38713301 FLI1 JASPAR yes 54226118
chr17 38713291 38713296 ETS2 TRANSFAC yes 21236196
chr17 38713291 38713296 ETS2 TRANSFAC yes 54226119
chr17 38713304 38713325 ZNF263 JASPAR yes 21236197
chr17 38713304 38713325 ZNF263 JASPAR yes 54226120
chr17 38713312 38713333 ZNF263 JASPAR yes 21236198
chr17 38713312 38713333 ZNF263 JASPAR yes 54226121
chr17 38713313 38713328 PRDM1 JASPAR yes 21236199
chr17 38713313 38713328 PRDM1 JASPAR yes 54226122
chr17 38713319 38713340 ZNF263 JASPAR yes 21236200
chr17 38713319 38713340 ZNF263 JASPAR yes 54226123
chr17 38713327 38713338 E2F4 JASPAR yes 21236201
chr17 38713327 38713338 E2F6 JASPAR yes 21236202
chr17 38713327 38713338 E2F4 JASPAR yes 54226124
chr17 38713327 38713338 E2F6 JASPAR yes 54226125
chr17 38713328 38713339 E2F1 JASPAR yes 21236203
chr17 38713328 38713339 E2F1 JASPAR yes 54226126
chr17 38713332 38713337 SP1 TRANSFAC yes 21236204
chr17 38713332 38713337 SP1 TRANSFAC yes 54226127
chr17 38713332 38713353 ZNF263 JASPAR yes 21236205
chr17 38713332 38713353 ZNF263 JASPAR yes 54226128
chr17 38713333 38713348 NR2C2 JASPAR yes 21236206
chr17 38713333 38713348 NR2C2 JASPAR yes 54226129
chr17 38713339 38713349 ZNF740 JASPAR yes 21236207
chr17 38713339 38713349 ZNF740 JASPAR yes 54226130
chr17 38713339 38713360 ZNF263 JASPAR yes 21236208
chr17 38713339 38713360 ZNF263 JASPAR yes 54226131
chr17 38713340 38713361 ZNF263 JASPAR yes 21236209
chr17 38713340 38713361 ZNF263 JASPAR yes 54226132
chr17 38713343 38713364 ZNF263 JASPAR yes 21236210
chr17 38713343 38713364 ZNF263 JASPAR yes 54226133
chr17 38713347 38713368 ZNF263 JASPAR yes 21236211
chr17 38713347 38713368 ZNF263 JASPAR yes 54226134
chr17 38713349 38713370 ZNF263 JASPAR yes 21236212
chr17 38713349 38713370 ZNF263 JASPAR yes 54226135
chr17 38713354 38713369 PRDM1 JASPAR yes 21236213
chr17 38713354 38713369 PRDM1 JASPAR yes 54226136
chr17 38713373 38713384 ELK4 JASPAR yes 21236214
chr17 38713373 38713384 ELK4 JASPAR yes 54226137
chr17 38713374 38713384 ELK1 JASPAR yes 21236215
chr17 38713374 38713384 GABPA JASPAR yes 21236216
chr17 38713374 38713384 ELK1 JASPAR yes 54226138
chr17 38713374 38713384 GABPA JASPAR yes 54226139
chr17 38713376 38713382 ETS1 JASPAR yes 21236217
chr17 38713376 38713382 SPI1 JASPAR yes 21236218
chr17 38713376 38713382 ETS1 JASPAR yes 54226140
chr17 38713376 38713382 SPI1 JASPAR yes 54226141
chr17 38713376 38713386 ELK1 JASPAR yes 21236219
chr17 38713376 38713386 ELK1 JASPAR yes 54226142
chr17 38713376 38713391 HSF1 JASPAR yes 21236220
chr17 38713376 38713391 HSF1 JASPAR yes 54226143
SNP sites on vista24739[chr17:38713026-38713386]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38713082 rs9902168 T G
POLR2A YY1
4868270
chr17 38713160 rs143086858 C T
GATA2 POLR2A
4868271
chr17 38713346 rs111378068 C A,G
GATA2 NR2C2 POLR2A TEAD4 ZNF263 ZNF740
4868272
Genes possibly regulated by vista24739[chr17:38713026-38713386]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38632080 38657849 - TNS4 ENSG00000131746.8 38657849 0.98 0.99 15769 44823
chr17 38710021 38721724 - CCR7 ENSG00000126353.3 38721724 0.98 0.94 15770 91662
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 0.77 0.97 15771 8626
Expression level of Genes
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miRNAs possibly regulated by vista24739[chr17:38713026-38713386]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results