EnhancerDB
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Enhancers that have rs9902168[chr17:38713082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 38713026 38713386 vista24739
VISTA
Transcript factors that have rs9902168[chr17:38713082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756012
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256529
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256530
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256531
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256532
chr17 38707308 38722266 POLR2A UCSC Txn Factor no Conserved 108256533
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256534
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256535
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256536
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256537
chr17 38707308 38722266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256538
chr17 38710837 38713443 TCF7L2 GTRD no Colon (HCT116) 21756126
chr17 38710837 38713443 TCF7L2 GTRD no Colon (HCT116) 108256698
chr17 38711654 38713092 TCF7L2 GTRD no Colon (HCT116) 21756127
chr17 38711654 38713092 TCF7L2 GTRD no Colon (HCT116) 108256699
chr17 38712534 38713955 TCF7L2 GTRD no Colon (HCT116) 21756129
chr17 38712534 38713955 TCF7L2 GTRD no Colon (HCT116) 108256701
chr17 38712732 38713296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756130
chr17 38712732 38713296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256702
chr17 38712762 38713188 TCF7L2 GTRD no Colon (HCT116) 21756131
chr17 38712762 38713188 TCF7L2 GTRD no Colon (HCT116) 108256703
chr17 38712984 38713304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756132
chr17 38712984 38713304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256704
chr17 38713007 38713507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756133
chr17 38713007 38713507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108256705
chr17 38713072 38713552 ZBTB33 GTRD no Lung (A549) 108256706
chr17 38713082 38713094 YY1 JASPAR yes 21236174
chr17 38713082 38713094 YY1 JASPAR yes 54226097
Genes associated with rs9902168[chr17:38713082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More