EnhancerDB
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  3. vista24759[chr17:39012522-39012675]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24759[chr17:39012522-39012675]
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Tissue distribution of vista24759
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Transcription factor that possibly regulate vista24759[chr17:39012522-39012675]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39012538 39012548 HMBOX1 JASPAR yes 21237299
chr17 39012538 39012548 HMBOX1 JASPAR yes 54241154
chr17 39012539 39012551 GRHL1 JASPAR yes 21237300
chr17 39012539 39012551 GRHL1 JASPAR yes 54241155
chr17 39012540 39012543 MYB TRANSFAC yes 21237301
chr17 39012540 39012543 MYB TRANSFAC yes 54241156
chr17 39012552 39012573 ZNF263 JASPAR yes 21237302
chr17 39012552 39012573 ZNF263 JASPAR yes 54241157
chr17 39012557 39012567 SP1 JASPAR yes 21237303
chr17 39012557 39012567 SP1 JASPAR yes 54241158
chr17 39012563 39012571 TBX5 JASPAR yes 21237304
chr17 39012563 39012571 TBX5 JASPAR yes 54241159
chr17 39012576 39012586 SREBF2 JASPAR yes 21237305
chr17 39012576 39012586 SREBF2 JASPAR yes 54241160
chr17 39012576 39012587 USF1 JASPAR yes 21237306
chr17 39012576 39012587 USF2 JASPAR yes 21237307
chr17 39012576 39012587 USF1 JASPAR yes 54241161
chr17 39012576 39012587 USF2 JASPAR yes 54241162
chr17 39012595 39012599 YY1 TRANSFAC yes 21237308
chr17 39012595 39012599 YY1 TRANSFAC yes 54241163
chr17 39012600 39012604 NFE TRANSFAC yes 21237309
chr17 39012600 39012604 NFE TRANSFAC yes 54241164
chr17 39012610 39012621 DUX4 JASPAR yes 21237310
chr17 39012610 39012621 DUX4 JASPAR yes 54241165
chr17 39012614 39012628 GATA2 JASPAR yes 21237311
chr17 39012614 39012628 GATA2 JASPAR yes 54241166
chr17 39012618 39012626 GATA3 JASPAR yes 21237312
chr17 39012618 39012626 GATA3 JASPAR yes 54241167
chr17 39012640 39012644 TEAD2 TRANSFAC yes 21237313
chr17 39012640 39012644 TEAD2 TRANSFAC yes 54241168
chr17 39012640 39012645 TBP TRANSFAC yes 21237314
chr17 39012640 39012645 TBP TRANSFAC yes 54241169
chr17 39012640 39012646 TMF TRANSFAC yes 21237315
chr17 39012640 39012646 TMF TRANSFAC yes 54241170
chr17 39012642 39012655 DUXA JASPAR yes 21237316
chr17 39012642 39012655 DUXA JASPAR yes 54241171
chr17 39012643 39012654 DUX4 JASPAR yes 21237317
chr17 39012643 39012654 DUX4 JASPAR yes 54241172
chr17 39012654 39012670 SOX8 JASPAR yes 21237318
chr17 39012654 39012670 SOX8 JASPAR yes 54241173
chr17 39012659 39012667 FOXL1 JASPAR yes 21237319
chr17 39012659 39012667 FOXL1 JASPAR yes 54241174
SNP sites on vista24759[chr17:39012522-39012675]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39012547 rs78125548 G T
GRHL1 HMBOX1
4870104
Genes possibly regulated by vista24759[chr17:39012522-39012675]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38922490 38928414 - KRT26 ENSG00000186393.5 38928414 1.0 0.0 15776 15892
chr17 38933060 38938786 - KRT27 ENSG00000171446.6 38938786 0.89 0.96 15777 26264
chr17 38948455 38956211 - KRT28 ENSG00000173908.8 38956211 0.99 0.0 15778 43689
chr17 38974369 38978847 - KRT10 ENSG00000186395.6 38978847 0.63 0.99 15779 66325
chr17 38975358 38992522 + TMEM99 ENSG00000167920.4 38975358 0.74 1.0 15780 62836
chr17 39017555 39023462 - KRT12 ENSG00000187242.4 39023462 0.89 0.97 15781 89213
chr17 39032193 39041479 - KRT20 ENSG00000171431.3 39041479 1.0 1.0 15782 71196
chr17 39078948 39093886 - KRT23 ENSG00000108244.12 39093886 0.98 1.0 15783 18789
Expression level of Genes
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miRNAs possibly regulated by vista24759[chr17:39012522-39012675]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results