EnhancerDB
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  3. vista24795[chr17:39823354-39823685]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24795[chr17:39823354-39823685]
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Tissue distribution of vista24795
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Transcription factor that possibly regulate vista24795[chr17:39823354-39823685]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39823208 39823852 CTCF UCSC Txn Factor no Conserved 108259398
chr17 39823268 39823569 SMC3 UCSC Txn Factor no Conserved 108259413
chr17 39823277 39823541 RAD21 UCSC Txn Factor no Conserved 108259420
chr17 39823357 39823369 ZBTB7B JASPAR yes 21239091
chr17 39823357 39823369 ZBTB7C JASPAR yes 21239092
chr17 39823357 39823369 ZBTB7B JASPAR yes 54270612
chr17 39823357 39823369 ZBTB7C JASPAR yes 54270613
chr17 39823358 39823370 ZBTB7A JASPAR yes 21239093
chr17 39823358 39823370 ZBTB7A JASPAR yes 54270614
chr17 39823360 39823365 SP1 TRANSFAC yes 21239094
chr17 39823360 39823365 SP1 TRANSFAC yes 54270615
chr17 39823371 39823392 REST JASPAR yes 21239095
chr17 39823371 39823392 REST JASPAR yes 54270616
chr17 39823402 39823421 CTCF JASPAR yes 21239096
chr17 39823402 39823421 CTCF JASPAR yes 54270617
chr17 39823403 39823415 YY1 JASPAR yes 21239097
chr17 39823403 39823415 YY1 JASPAR yes 54270618
chr17 39823406 39823412 YY1 JASPAR yes 21239098
chr17 39823406 39823412 YY1 JASPAR yes 54270619
chr17 39823411 39823426 RFX5 JASPAR yes 21239099
chr17 39823411 39823426 RFX5 JASPAR yes 54270620
chr17 39823420 39823433 ELF1 JASPAR yes 21239100
chr17 39823420 39823433 ELF1 JASPAR yes 54270621
chr17 39823421 39823433 EHF JASPAR yes 21239101
chr17 39823421 39823433 ELF4 JASPAR yes 21239102
chr17 39823421 39823433 EHF JASPAR yes 54270622
chr17 39823421 39823433 ELF4 JASPAR yes 54270623
chr17 39823421 39823434 ELF3 JASPAR yes 21239103
chr17 39823421 39823434 ELF3 JASPAR yes 54270624
chr17 39823422 39823433 ELF5 JASPAR yes 21239104
chr17 39823422 39823433 ELF5 JASPAR yes 54270625
chr17 39823423 39823433 ERF JASPAR yes 21239105
chr17 39823423 39823433 ETS1 JASPAR yes 21239106
chr17 39823423 39823433 ETV6 JASPAR yes 21239107
chr17 39823423 39823433 GABPA JASPAR yes 21239108
chr17 39823423 39823433 ERF JASPAR yes 54270626
chr17 39823423 39823433 ETS1 JASPAR yes 54270627
chr17 39823423 39823433 ETV6 JASPAR yes 54270628
chr17 39823423 39823433 GABPA JASPAR yes 54270629
chr17 39823423 39823434 ELK4 JASPAR yes 21239109
chr17 39823423 39823434 FLI1 JASPAR yes 21239110
chr17 39823423 39823434 ELK4 JASPAR yes 54270630
chr17 39823423 39823434 FLI1 JASPAR yes 54270631
chr17 39823424 39823432 EHF JASPAR yes 21239111
chr17 39823424 39823432 FEV JASPAR yes 21239112
chr17 39823424 39823432 EHF JASPAR yes 54270632
chr17 39823424 39823432 FEV JASPAR yes 54270633
chr17 39823425 39823432 SPI1 JASPAR yes 21239113
chr17 39823425 39823432 SPI1 JASPAR yes 54270634
chr17 39823436 39823440 NFE TRANSFAC yes 21239114
chr17 39823436 39823440 NFE TRANSFAC yes 54270635
chr17 39823453 39823458 MYB TRANSFAC yes 21239115
chr17 39823453 39823458 MYB TRANSFAC yes 54270636
chr17 39823458 39823468 ETV3 JASPAR yes 21239116
chr17 39823458 39823468 ETV3 JASPAR yes 54270637
chr17 39823466 39823477 NFE2L2 JASPAR yes 21239117
chr17 39823466 39823477 NFE2L2 JASPAR yes 54270638
chr17 39823471 39823475 ESR1 TRANSFAC yes 21239118
chr17 39823471 39823475 ESR1 TRANSFAC yes 54270639
chr17 39823471 39823488 PAX1 JASPAR yes 21239119
chr17 39823471 39823488 PAX1 JASPAR yes 54270640
chr17 39823497 39823511 ZIC1 JASPAR yes 21239120
chr17 39823497 39823511 ZIC1 JASPAR yes 54270641
chr17 39823497 39823512 ZIC4 JASPAR yes 21239121
chr17 39823497 39823512 ZIC4 JASPAR yes 54270642
chr17 39823519 39823534 PRDM1 JASPAR yes 21239122
chr17 39823519 39823534 PRDM1 JASPAR yes 54270643
chr17 39823576 39823582 YY1 JASPAR yes 21239123
chr17 39823576 39823582 YY1 JASPAR yes 54270644
chr17 39823576 39823587 ESRRB JASPAR yes 21239124
chr17 39823576 39823587 ESRRB JASPAR yes 54270645
chr17 39823578 39823595 RARA JASPAR yes 21239125
chr17 39823578 39823595 RARA JASPAR yes 54270646
chr17 39823586 39823600 BATF3 JASPAR yes 21239126
chr17 39823586 39823600 BATF3 JASPAR yes 54270647
chr17 39823623 39823628 SP1 TRANSFAC yes 21239127
chr17 39823623 39823628 SP1 TRANSFAC yes 54270648
chr17 39823623 39823638 MEF2C JASPAR yes 21239128
chr17 39823623 39823638 MEF2C JASPAR yes 54270649
chr17 39823624 39823639 MEF2A JASPAR yes 21239129
chr17 39823624 39823639 MEF2A JASPAR yes 54270650
chr17 39823642 39823655 SCRT2 JASPAR yes 21239130
chr17 39823642 39823655 SCRT2 JASPAR yes 54270651
chr17 39823651 39823670 CTCF JASPAR yes 21239131
chr17 39823651 39823670 CTCF JASPAR yes 54270652
chr17 39823652 39823665 SCRT2 JASPAR yes 21239132
chr17 39823652 39823665 SCRT2 JASPAR yes 54270653
chr17 39823659 39823679 ESR1 JASPAR yes 21239133
chr17 39823659 39823679 ESR1 JASPAR yes 54270654
chr17 39823664 39823679 ESR2 JASPAR yes 21239134
chr17 39823664 39823679 ESR2 JASPAR yes 54270655
chr17 39823664 39823684 ESR1 JASPAR yes 21239135
chr17 39823664 39823684 ESR1 JASPAR yes 54270656
chr17 39823672 39823678 NFE2 TRANSFAC yes 21239136
chr17 39823672 39823678 NFE2 TRANSFAC yes 54270657
chr17 39823673 39823685 TFAP2A JASPAR yes 21239137
chr17 39823673 39823685 TFAP2A JASPAR yes 54270658
chr17 39823673 39823688 TFAP2A JASPAR yes 21239138
chr17 39823673 39823688 TFAP2A JASPAR yes 54270659
SNP sites on vista24795[chr17:39823354-39823685]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39823369 rs374762230 C T
CTCF RAD21 SMC3 ZBTB7A ZBTB7B ZBTB7C
4874349
chr17 39823504 rs8076561 A G
CTCF RAD21 SMC3 ZIC1 ZIC4
4874350
chr17 39823675 rs76279487 G C
CTCF ESR1 ESR2 NFE2 TFAP2A
4874351
chr17 39823678 rs76248929 C G,T
CTCF ESR1 ESR2 NFE2 TFAP2A
4874352
Genes possibly regulated by vista24795[chr17:39823354-39823685]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39722096 39728310 - KRT9 ENSG00000171403.5 39728310 0.99 1.0 15832 4956
chr17 39738531 39743173 - KRT14 ENSG00000186847.5 39743173 1.0 0.99 15833 19819
chr17 39766030 39772151 - KRT16 ENSG00000186832.4 39772151 0.99 1.0 15834 48797
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 1.0 1.0 15835 57740
chr17 39845137 39848920 + EIF1 ENSG00000173812.6 39845137 0.55 1.0 15837 78548
chr17 39868578 39872221 + GAST ENSG00000184502.3 39868578 0.98 1.0 15838 55107
chr17 39873994 39890896 - HAP1 ENSG00000173805.11 39890896 0.9 1.0 15839 32789
Expression level of Genes
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miRNAs possibly regulated by vista24795[chr17:39823354-39823685]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results