EnhancerDB
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  3. rs76248929[chr17:39823678]
Enhancers that have rs76248929[chr17:39823678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
chr17 39823354 39823685 vista24795
VISTA
Transcript factors that have rs76248929[chr17:39823678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39823135 39823711 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259392
chr17 39823208 39823852 CTCF UCSC Txn Factor no Conserved 108259398
chr17 39823223 39823847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758184
chr17 39823223 39823847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259402
chr17 39823229 39823685 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758186
chr17 39823229 39823685 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259404
chr17 39823234 39823690 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259406
chr17 39823268 39823835 ZNF274 GTRD no Blood (GM12878) 21758190
chr17 39823268 39823835 ZNF274 GTRD no Blood (GM12878) 108259414
chr17 39823306 39824232 STAT3 GTRD no Blood (OCI-LY7) 108259440
chr17 39823306 39824232 STAT3 GTRD no Blood (OCI-LY7) 108259441
chr17 39823339 39823885 ZNF274 GTRD no Blood (GM12878) 21758215
chr17 39823339 39823885 ZNF274 GTRD no Blood (GM12878) 108259453
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 21758216
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 108259455
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 108259456
chr17 39823392 39824087 ZNF274 GTRD no Blood (GM12878) 21758217
chr17 39823392 39824087 ZNF274 GTRD no Blood (GM12878) 108259457
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 21758218
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 108259458
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 108259459
chr17 39823434 39823859 ZNF274 GTRD no Bone Marrow (K562) 21758219
chr17 39823434 39823859 ZNF274 GTRD no Bone Marrow (K562) 108259460
chr17 39823477 39823819 ZNF274 GTRD no Blood (GM12878) 21758220
chr17 39823477 39823819 ZNF274 GTRD no Blood (GM12878) 108259461
chr17 39823644 39824021 ZNF274 GTRD no Bone Marrow (K562) 21758221
chr17 39823644 39824021 ZNF274 GTRD no Bone Marrow (K562) 108259462
chr17 39823659 39823679 ESR1 JASPAR yes 21239133
chr17 39823659 39823679 ESR1 JASPAR yes 54270654
chr17 39823664 39823679 ESR2 JASPAR yes 21239134
chr17 39823664 39823679 ESR2 JASPAR yes 54270655
chr17 39823664 39823684 ESR1 JASPAR yes 21239135
chr17 39823664 39823684 ESR1 JASPAR yes 54270656
chr17 39823672 39823678 NFE2 TRANSFAC yes 21239136
chr17 39823672 39823678 NFE2 TRANSFAC yes 54270657
chr17 39823673 39823685 TFAP2A JASPAR yes 21239137
chr17 39823673 39823685 TFAP2A JASPAR yes 54270658
chr17 39823673 39823688 TFAP2A JASPAR yes 21239138
chr17 39823673 39823688 TFAP2A JASPAR yes 54270659
chr17 39823676 39823946 ZNF274 GTRD no Bone Marrow (K562) 21758222
chr17 39823676 39823946 ZNF274 GTRD no Bone Marrow (K562) 108259463
Genes associated with rs76248929[chr17:39823678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More