EnhancerDB
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  3. vista24799[chr17:39832714-39833014]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24799[chr17:39832714-39833014]
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Tissue distribution of vista24799
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Transcription factor that possibly regulate vista24799[chr17:39832714-39833014]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 39832579 39832990 RELA UCSC Txn Factor no Conserved 108259493
chr17 39832730 39832954 EBF1 UCSC Txn Factor no Conserved 108259510
chr17 39832725 39832735 RUNX3 JASPAR yes 21239358
chr17 39832725 39832735 RUNX3 JASPAR yes 54272096
chr17 39832739 39832753 POU1F1 JASPAR yes 21239359
chr17 39832739 39832753 POU1F1 JASPAR yes 54272097
chr17 39832740 39832752 POU3F2 JASPAR yes 21239360
chr17 39832740 39832752 POU3F2 JASPAR yes 54272098
chr17 39832743 39832758 HNF1A JASPAR yes 21239361
chr17 39832743 39832758 HNF1A JASPAR yes 54272099
chr17 39832744 39832754 GSX1 JASPAR yes 21239362
chr17 39832744 39832754 GSX2 JASPAR yes 21239363
chr17 39832744 39832754 HOXA2 JASPAR yes 21239364
chr17 39832744 39832754 HOXB2 JASPAR yes 21239365
chr17 39832744 39832754 HOXB3 JASPAR yes 21239366
chr17 39832744 39832754 LHX2 JASPAR yes 21239367
chr17 39832744 39832754 MEOX1 JASPAR yes 21239368
chr17 39832744 39832754 MEOX2 JASPAR yes 21239369
chr17 39832744 39832754 NOTO JASPAR yes 21239370
chr17 39832744 39832754 GSX1 JASPAR yes 54272100
chr17 39832744 39832754 GSX2 JASPAR yes 54272101
chr17 39832744 39832754 HOXA2 JASPAR yes 54272102
chr17 39832744 39832754 HOXB2 JASPAR yes 54272103
chr17 39832744 39832754 HOXB3 JASPAR yes 54272104
chr17 39832744 39832754 LHX2 JASPAR yes 54272105
chr17 39832744 39832754 MEOX1 JASPAR yes 54272106
chr17 39832744 39832754 MEOX2 JASPAR yes 54272107
chr17 39832744 39832754 NOTO JASPAR yes 54272108
chr17 39832744 39832757 HNF1B JASPAR yes 21239371
chr17 39832744 39832757 HNF1B JASPAR yes 54272109
chr17 39832745 39832753 NKX6-1 JASPAR yes 21239372
chr17 39832745 39832753 NKX6-2 JASPAR yes 21239373
chr17 39832745 39832753 NKX6-1 JASPAR yes 54272110
chr17 39832745 39832753 NKX6-2 JASPAR yes 54272111
chr17 39832745 39832755 POU6F2 JASPAR yes 21239374
chr17 39832745 39832755 POU6F2 JASPAR yes 54272112
chr17 39832745 39832756 BATF JASPAR yes 21239375
chr17 39832745 39832756 BATF JASPAR yes 54272113
chr17 39832745 39832757 HNF1B JASPAR yes 21239376
chr17 39832745 39832757 HNF1B JASPAR yes 54272114
chr17 39832760 39832771 NFKB1 JASPAR yes 21239377
chr17 39832760 39832771 NFKB1 JASPAR yes 54272115
chr17 39832761 39832771 NFKB1 JASPAR yes 21239378
chr17 39832761 39832771 RELA JASPAR yes 21239379
chr17 39832761 39832771 REL JASPAR yes 21239380
chr17 39832761 39832771 NFKB1 JASPAR yes 54272116
chr17 39832761 39832771 RELA JASPAR yes 54272117
chr17 39832761 39832771 REL JASPAR yes 54272118
chr17 39832781 39832800 RFX2 JASPAR yes 21239381
chr17 39832781 39832800 RFX2 JASPAR yes 54272119
chr17 39832785 39832801 RFX5 JASPAR yes 21239382
chr17 39832785 39832801 RFX5 JASPAR yes 54272120
chr17 39832802 39832812 TFEB JASPAR yes 21239383
chr17 39832802 39832812 TFEC JASPAR yes 21239384
chr17 39832802 39832812 TFEB JASPAR yes 54272121
chr17 39832802 39832812 TFEC JASPAR yes 54272122
chr17 39832802 39832813 USF1 JASPAR yes 21239385
chr17 39832802 39832813 USF2 JASPAR yes 21239386
chr17 39832802 39832813 USF1 JASPAR yes 54272123
chr17 39832802 39832813 USF2 JASPAR yes 54272124
chr17 39832803 39832813 MAX JASPAR yes 21239387
chr17 39832803 39832813 MAX JASPAR yes 54272125
chr17 39832829 39832848 CTCF JASPAR yes 21239388
chr17 39832829 39832848 CTCF JASPAR yes 54272126
chr17 39832832 39832842 SP1 JASPAR yes 21239389
chr17 39832832 39832842 SP1 JASPAR yes 54272127
chr17 39832840 39832855 TFAP2A JASPAR yes 21239390
chr17 39832840 39832855 TFAP2C JASPAR yes 21239391
chr17 39832840 39832855 TFAP2A JASPAR yes 54272128
chr17 39832840 39832855 TFAP2C JASPAR yes 54272129
chr17 39832845 39832856 EBF1 JASPAR yes 21239392
chr17 39832845 39832856 EBF1 JASPAR yes 54272130
chr17 39832849 39832854 TFAP2A TRANSFAC yes 21239393
chr17 39832849 39832854 TFAP2A TRANSFAC yes 54272131
chr17 39832849 39832855 MZF1 JASPAR yes 21239394
chr17 39832849 39832855 MZF1 JASPAR yes 54272132
chr17 39832851 39832857 MAZ TRANSFAC yes 21239395
chr17 39832851 39832857 MAZ TRANSFAC yes 54272133
chr17 39832851 39832862 E2F6 JASPAR yes 21239396
chr17 39832851 39832862 E2F6 JASPAR yes 54272134
chr17 39832853 39832874 ZNF263 JASPAR yes 21239397
chr17 39832853 39832874 ZNF263 JASPAR yes 54272135
chr17 39832855 39832860 ETS2 TRANSFAC yes 21239398
chr17 39832855 39832860 ETS2 TRANSFAC yes 54272136
chr17 39832870 39832881 DUX4 JASPAR yes 21239399
chr17 39832870 39832881 DUX4 JASPAR yes 54272137
chr17 39832886 39832901 NFYB JASPAR yes 21239400
chr17 39832886 39832901 NFYB JASPAR yes 54272138
chr17 39832892 39832907 JUND JASPAR yes 21239401
chr17 39832892 39832907 JUND JASPAR yes 54272139
chr17 39832893 39832897 H1TF2 TRANSFAC yes 21239402
chr17 39832893 39832897 NFE TRANSFAC yes 21239403
chr17 39832893 39832897 SRF TRANSFAC yes 21239404
chr17 39832893 39832897 H1TF2 TRANSFAC yes 54272140
chr17 39832893 39832897 NFE TRANSFAC yes 54272141
chr17 39832893 39832897 SRF TRANSFAC yes 54272142
chr17 39832893 39832906 JUN JASPAR yes 21239405
chr17 39832893 39832906 JUN JASPAR yes 54272143
chr17 39832894 39832907 ATF4 JASPAR yes 21239406
chr17 39832894 39832907 ATF4 JASPAR yes 54272144
chr17 39832894 39832908 ATF7 JASPAR yes 21239407
chr17 39832894 39832908 ATF7 JASPAR yes 54272145
chr17 39832895 39832907 DBP JASPAR yes 21239408
chr17 39832895 39832907 HLF JASPAR yes 21239409
chr17 39832895 39832907 JDP2 JASPAR yes 21239410
chr17 39832895 39832907 DBP JASPAR yes 54272146
chr17 39832895 39832907 HLF JASPAR yes 54272147
chr17 39832895 39832907 JDP2 JASPAR yes 54272148
chr17 39832896 39832907 CEBPB JASPAR yes 21239411
chr17 39832896 39832907 CEBPB JASPAR yes 54272149
chr17 39832896 39832909 DUXA JASPAR yes 21239412
chr17 39832896 39832909 DUXA JASPAR yes 54272150
chr17 39832897 39832908 DUX4 JASPAR yes 21239413
chr17 39832897 39832908 NFIL3 JASPAR yes 21239414
chr17 39832897 39832908 DUX4 JASPAR yes 54272151
chr17 39832897 39832908 NFIL3 JASPAR yes 54272152
chr17 39832900 39832917 PAX9 JASPAR yes 21239415
chr17 39832900 39832917 PAX9 JASPAR yes 54272153
chr17 39832929 39832940 HOXA10 JASPAR yes 21239416
chr17 39832929 39832940 HOXA10 JASPAR yes 54272154
chr17 39832930 39832939 CDX1 JASPAR yes 21239417
chr17 39832930 39832939 CDX1 JASPAR yes 54272155
chr17 39832930 39832940 HOXA13 JASPAR yes 21239418
chr17 39832930 39832940 HOXB13 JASPAR yes 21239419
chr17 39832930 39832940 HOXD13 JASPAR yes 21239420
chr17 39832930 39832940 HOXA13 JASPAR yes 54272156
chr17 39832930 39832940 HOXB13 JASPAR yes 54272157
chr17 39832930 39832940 HOXD13 JASPAR yes 54272158
chr17 39832936 39832948 IRF1 JASPAR yes 21239421
chr17 39832936 39832948 IRF1 JASPAR yes 54272159
chr17 39832986 39832991 ATF1 TRANSFAC yes 21239422
chr17 39832986 39832991 ATF1 TRANSFAC yes 54272160
chr17 39832996 39833002 MZF1 JASPAR yes 21239423
chr17 39832996 39833002 MZF1 JASPAR yes 54272161
chr17 39833007 39833018 TBX20 JASPAR yes 21239424
chr17 39833007 39833018 TBX20 JASPAR yes 54272162
chr17 39833009 39833017 TBX5 JASPAR yes 21239425
chr17 39833009 39833017 TBX5 JASPAR yes 54272163
SNP sites on vista24799[chr17:39832714-39833014]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 39832751 rs116358962 G A
BATF EBF1 GSX1 GSX2 HNF1A HNF1B HOXA2 HOXB2 HOXB3 LHX2 MEOX1 MEOX2 NKX6-1 NKX6-2 NOTO POU1F1 POU3F2 POU6F2 RELA
4874551
chr17 39832858 rs192173882 G A
E2F6 EBF1 ETS2 RELA ZNF263
4874552
chr17 39832929 rs73297998 G C
EBF1 HOXA10 RELA
4874553
Genes possibly regulated by vista24799[chr17:39832714-39833014]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 39738531 39743173 - KRT14 ENSG00000186847.5 39743173 1.0 0.99 15833 10459
chr17 39766030 39772151 - KRT16 ENSG00000186832.4 39772151 0.99 1.0 15834 39437
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 1.0 1.0 15835 48380
chr17 39845137 39848920 + EIF1 ENSG00000173812.6 39845137 0.55 1.0 15837 87877
chr17 39868578 39872221 + GAST ENSG00000184502.3 39868578 0.98 1.0 15838 64436
chr17 39873994 39890896 - HAP1 ENSG00000173805.11 39890896 0.9 1.0 15839 42118
Expression level of Genes
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miRNAs possibly regulated by vista24799[chr17:39832714-39833014]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results