EnhancerDB
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Enhancers that have rs116358962[chr17:39832751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
chr17 39832714 39833014 vista24799
VISTA
Transcript factors that have rs116358962[chr17:39832751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39832403 39832979 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259485
chr17 39832456 39833032 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259486
chr17 39832473 39833013 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259487
chr17 39832546 39832816 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259488
chr17 39832550 39832830 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259489
chr17 39832558 39832994 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758227
chr17 39832558 39832994 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259490
chr17 39832569 39832939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758228
chr17 39832569 39832939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259491
chr17 39832579 39832919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259492
chr17 39832579 39832990 RELA UCSC Txn Factor no Conserved 108259493
chr17 39832592 39832928 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259494
chr17 39832592 39832972 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758229
chr17 39832592 39832972 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259495
chr17 39832616 39833136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758230
chr17 39832616 39833136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259496
chr17 39832627 39832937 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758231
chr17 39832627 39832937 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259497
chr17 39832644 39832928 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259498
chr17 39832644 39833034 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259499
chr17 39832645 39832975 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758232
chr17 39832645 39832975 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259500
chr17 39832649 39832969 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758233
chr17 39832649 39832969 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259501
chr17 39832650 39832870 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259502
chr17 39832663 39833063 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758234
chr17 39832663 39833063 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259503
chr17 39832676 39832956 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758235
chr17 39832676 39832956 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259504
chr17 39832682 39832922 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108259505
chr17 39832689 39832859 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758236
chr17 39832689 39832859 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259506
chr17 39832690 39832966 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758237
chr17 39832690 39832966 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259507
chr17 39832694 39832894 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259508
chr17 39832716 39833096 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758238
chr17 39832716 39833096 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259509
chr17 39832730 39832954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758239
chr17 39832730 39832954 EBF1 UCSC Txn Factor no Conserved 108259510
chr17 39832730 39832954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259511
chr17 39832739 39832753 POU1F1 JASPAR yes 21239359
chr17 39832739 39832753 POU1F1 JASPAR yes 54272097
chr17 39832740 39832752 POU3F2 JASPAR yes 21239360
chr17 39832740 39832752 POU3F2 JASPAR yes 54272098
chr17 39832743 39832758 HNF1A JASPAR yes 21239361
chr17 39832743 39832758 HNF1A JASPAR yes 54272099
chr17 39832744 39832754 GSX1 JASPAR yes 21239362
chr17 39832744 39832754 GSX2 JASPAR yes 21239363
chr17 39832744 39832754 HOXA2 JASPAR yes 21239364
chr17 39832744 39832754 HOXB2 JASPAR yes 21239365
chr17 39832744 39832754 HOXB3 JASPAR yes 21239366
chr17 39832744 39832754 LHX2 JASPAR yes 21239367
chr17 39832744 39832754 MEOX1 JASPAR yes 21239368
chr17 39832744 39832754 MEOX2 JASPAR yes 21239369
chr17 39832744 39832754 NOTO JASPAR yes 21239370
chr17 39832744 39832754 GSX1 JASPAR yes 54272100
chr17 39832744 39832754 GSX2 JASPAR yes 54272101
chr17 39832744 39832754 HOXA2 JASPAR yes 54272102
chr17 39832744 39832754 HOXB2 JASPAR yes 54272103
chr17 39832744 39832754 HOXB3 JASPAR yes 54272104
chr17 39832744 39832754 LHX2 JASPAR yes 54272105
chr17 39832744 39832754 MEOX1 JASPAR yes 54272106
chr17 39832744 39832754 MEOX2 JASPAR yes 54272107
chr17 39832744 39832754 NOTO JASPAR yes 54272108
chr17 39832744 39832757 HNF1B JASPAR yes 21239371
chr17 39832744 39832757 HNF1B JASPAR yes 54272109
chr17 39832745 39832753 NKX6-1 JASPAR yes 21239372
chr17 39832745 39832753 NKX6-2 JASPAR yes 21239373
chr17 39832745 39832753 NKX6-1 JASPAR yes 54272110
chr17 39832745 39832753 NKX6-2 JASPAR yes 54272111
chr17 39832745 39832755 POU6F2 JASPAR yes 21239374
chr17 39832745 39832755 POU6F2 JASPAR yes 54272112
chr17 39832745 39832756 BATF JASPAR yes 21239375
chr17 39832745 39832756 BATF JASPAR yes 54272113
chr17 39832745 39832757 HNF1B JASPAR yes 21239376
chr17 39832745 39832757 HNF1B JASPAR yes 54272114
Genes associated with rs116358962[chr17:39832751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More