EnhancerDB
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  3. vista24812[chr17:40400517-40401003]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24812[chr17:40400517-40401003]
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Tissue distribution of vista24812
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Transcription factor that possibly regulate vista24812[chr17:40400517-40401003]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 40400445 40401406 POLR2A UCSC Txn Factor no Conserved 108259996
chr17 40400668 40400905 ELF1 UCSC Txn Factor no Conserved 108260018
chr17 40400716 40400910 USF1 UCSC Txn Factor no Conserved 108260025
chr17 40400524 40400535 PHOX2A JASPAR yes 21239924
chr17 40400524 40400535 PROP1 JASPAR yes 21239925
chr17 40400524 40400535 PHOX2A JASPAR yes 54289250
chr17 40400524 40400535 PROP1 JASPAR yes 54289251
chr17 40400528 40400536 DLX6 JASPAR yes 21239926
chr17 40400528 40400536 MSX1 JASPAR yes 21239927
chr17 40400528 40400536 DLX6 JASPAR yes 54289252
chr17 40400528 40400536 MSX1 JASPAR yes 54289253
chr17 40400536 40400552 RFX3 JASPAR yes 21239928
chr17 40400536 40400552 RFX5 JASPAR yes 21239929
chr17 40400536 40400552 RFX3 JASPAR yes 54289254
chr17 40400536 40400552 RFX5 JASPAR yes 54289255
chr17 40400557 40400568 STAT1 JASPAR yes 21239930
chr17 40400557 40400568 STAT1 JASPAR yes 54289256
chr17 40400564 40400567 MYB TRANSFAC yes 21239931
chr17 40400564 40400567 MYB TRANSFAC yes 54289257
chr17 40400571 40400584 SMAD2 JASPAR yes 21239932
chr17 40400571 40400584 SMAD2 JASPAR yes 54289258
chr17 40400588 40400600 MEF2D JASPAR yes 21239933
chr17 40400588 40400600 MEF2D JASPAR yes 54289259
chr17 40400589 40400599 MEF2A JASPAR yes 21239934
chr17 40400589 40400599 MEF2A JASPAR yes 54289260
chr17 40400646 40400666 RREB1 JASPAR yes 21239935
chr17 40400646 40400666 RREB1 JASPAR yes 54289261
chr17 40400669 40400682 SMAD2 JASPAR yes 21239936
chr17 40400669 40400682 SMAD2 JASPAR yes 54289262
chr17 40400674 40400682 TBX15 JASPAR yes 21239937
chr17 40400674 40400682 TBX15 JASPAR yes 54289263
chr17 40400682 40400692 HMBOX1 JASPAR yes 21239938
chr17 40400682 40400692 HMBOX1 JASPAR yes 54289264
chr17 40400684 40400687 MYB TRANSFAC yes 21239939
chr17 40400684 40400687 MYB TRANSFAC yes 54289265
chr17 40400688 40400691 MYB TRANSFAC yes 21239940
chr17 40400688 40400691 MYB TRANSFAC yes 54289266
chr17 40400689 40400699 MSC JASPAR yes 21239941
chr17 40400689 40400699 MSC JASPAR yes 54289267
chr17 40400717 40400722 GATA2 JASPAR yes 21239942
chr17 40400717 40400722 GATA2 JASPAR yes 54289268
chr17 40400720 40400723 MYB TRANSFAC yes 21239943
chr17 40400720 40400723 MYB TRANSFAC yes 54289269
chr17 40400756 40400761 SP1 TRANSFAC yes 21239944
chr17 40400756 40400761 SP1 TRANSFAC yes 54289270
chr17 40400766 40400777 STAT1 JASPAR yes 21239945
chr17 40400766 40400777 STAT1 JASPAR yes 54289271
chr17 40400767 40400777 ELK1 JASPAR yes 21239946
chr17 40400767 40400777 ELK1 JASPAR yes 54289272
chr17 40400768 40400779 ETV2 JASPAR yes 21239947
chr17 40400768 40400779 ETV2 JASPAR yes 54289273
chr17 40400769 40400778 ELK4 JASPAR yes 21239948
chr17 40400769 40400778 ELK4 JASPAR yes 54289274
chr17 40400769 40400779 ELK1 JASPAR yes 21239949
chr17 40400769 40400779 ELK3 JASPAR yes 21239950
chr17 40400769 40400779 ETS1 JASPAR yes 21239951
chr17 40400769 40400779 ETV1 JASPAR yes 21239952
chr17 40400769 40400779 ETV4 JASPAR yes 21239953
chr17 40400769 40400779 FEV JASPAR yes 21239954
chr17 40400769 40400779 FLI1 JASPAR yes 21239955
chr17 40400769 40400779 ELK1 JASPAR yes 54289275
chr17 40400769 40400779 ELK3 JASPAR yes 54289276
chr17 40400769 40400779 ETS1 JASPAR yes 54289277
chr17 40400769 40400779 ETV1 JASPAR yes 54289278
chr17 40400769 40400779 ETV4 JASPAR yes 54289279
chr17 40400769 40400779 FEV JASPAR yes 54289280
chr17 40400769 40400779 FLI1 JASPAR yes 54289281
chr17 40400769 40400780 ELK4 JASPAR yes 21239956
chr17 40400769 40400780 ELK4 JASPAR yes 54289282
chr17 40400771 40400777 ETS1 JASPAR yes 21239957
chr17 40400771 40400777 SPI1 JASPAR yes 21239958
chr17 40400771 40400777 ETS1 JASPAR yes 54289283
chr17 40400771 40400777 SPI1 JASPAR yes 54289284
chr17 40400791 40400796 H4TF1 TRANSFAC yes 21239959
chr17 40400791 40400796 H4TF1 TRANSFAC yes 54289285
chr17 40400792 40400800 FEV JASPAR yes 21239960
chr17 40400792 40400800 FEV JASPAR yes 54289286
chr17 40400794 40400799 ETS2 TRANSFAC yes 21239961
chr17 40400794 40400799 ETS2 TRANSFAC yes 54289287
chr17 40400802 40400813 ESRRA JASPAR yes 21239962
chr17 40400802 40400813 ESRRA JASPAR yes 54289288
chr17 40400802 40400815 NR2F1 JASPAR yes 21239963
chr17 40400802 40400815 NR2F1 JASPAR yes 54289289
chr17 40400804 40400812 NR4A2 JASPAR yes 21239964
chr17 40400804 40400812 NR4A2 JASPAR yes 54289290
chr17 40400806 40400810 ESR1 TRANSFAC yes 21239965
chr17 40400806 40400810 ESR1 TRANSFAC yes 54289291
chr17 40400822 40400840 NFYA JASPAR yes 21239966
chr17 40400822 40400840 NFYA JASPAR yes 54289292
chr17 40400822 40400843 IRF1 JASPAR yes 21239967
chr17 40400822 40400843 IRF1 JASPAR yes 54289293
chr17 40400824 40400839 IRF9 JASPAR yes 21239968
chr17 40400824 40400839 IRF9 JASPAR yes 54289294
chr17 40400825 40400839 IRF7 JASPAR yes 21239969
chr17 40400825 40400839 IRF7 JASPAR yes 54289295
chr17 40400847 40400856 NFIX JASPAR yes 21239970
chr17 40400847 40400856 NFIX JASPAR yes 54289296
chr17 40400847 40400857 NFIA JASPAR yes 21239971
chr17 40400847 40400857 NFIA JASPAR yes 54289297
chr17 40400849 40400855 NFIC JASPAR yes 21239972
chr17 40400849 40400855 NFIC JASPAR yes 54289298
chr17 40400850 40400871 ZNF263 JASPAR yes 21239973
chr17 40400850 40400871 ZNF263 JASPAR yes 54289299
chr17 40400855 40400865 MZF1 JASPAR yes 21239974
chr17 40400855 40400865 MZF1 JASPAR yes 54289300
chr17 40400858 40400864 SP1 TRANSFAC yes 21239975
chr17 40400858 40400864 SP1 TRANSFAC yes 54289301
chr17 40400878 40400888 CEBPG JASPAR yes 21239976
chr17 40400878 40400888 CEBPG JASPAR yes 54289302
chr17 40400890 40400894 YY1 TRANSFAC yes 21239977
chr17 40400890 40400894 YY1 TRANSFAC yes 54289303
chr17 40400895 40400910 STAT1 JASPAR yes 21239978
chr17 40400895 40400910 STAT1 JASPAR yes 54289304
chr17 40400897 40400908 STAT1 JASPAR yes 21239979
chr17 40400897 40400908 STAT3 JASPAR yes 21239980
chr17 40400897 40400908 STAT1 JASPAR yes 54289305
chr17 40400897 40400908 STAT3 JASPAR yes 54289306
chr17 40400911 40400925 GATA2 JASPAR yes 21239981
chr17 40400911 40400925 GATA2 JASPAR yes 54289307
chr17 40400912 40400927 FOXP1 JASPAR yes 21239982
chr17 40400912 40400927 FOXP1 JASPAR yes 54289308
chr17 40400913 40400921 GATA3 JASPAR yes 21239983
chr17 40400913 40400921 GATA3 JASPAR yes 54289309
chr17 40400915 40400926 FOXP2 JASPAR yes 21239984
chr17 40400915 40400926 FOXP2 JASPAR yes 54289310
chr17 40400917 40400938 IRF1 JASPAR yes 21239985
chr17 40400917 40400938 IRF1 JASPAR yes 54289311
chr17 40400920 40400936 SOX4 JASPAR yes 21239986
chr17 40400920 40400936 SOX4 JASPAR yes 54289312
chr17 40400921 40400927 SOX10 JASPAR yes 21239987
chr17 40400921 40400927 SOX10 JASPAR yes 54289313
chr17 40400923 40400944 IRF1 JASPAR yes 21239988
chr17 40400923 40400944 IRF1 JASPAR yes 54289314
chr17 40400948 40400964 SOX4 JASPAR yes 21239989
chr17 40400948 40400964 SOX4 JASPAR yes 54289315
chr17 40400949 40400964 SOX21 JASPAR yes 21239990
chr17 40400949 40400964 SOX21 JASPAR yes 54289316
chr17 40400960 40400977 PAX9 JASPAR yes 21239991
chr17 40400960 40400977 PAX9 JASPAR yes 54289317
chr17 40400961 40400975 PAX6 JASPAR yes 21239992
chr17 40400961 40400975 PAX6 JASPAR yes 54289318
chr17 40400961 40400980 PAX5 JASPAR yes 21239993
chr17 40400961 40400980 PAX5 JASPAR yes 54289319
chr17 40400981 40400985 LFA1 TRANSFAC yes 21239994
chr17 40400981 40400985 LFA1 TRANSFAC yes 54289320
SNP sites on vista24812[chr17:40400517-40401003]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 40400597 rs59157462 T C
MEF2A MEF2D POLR2A
4877012
chr17 40400600 rs547784159 A G
MEF2D POLR2A
4877013
chr17 40400682 rs139592102 T C
ELF1 HMBOX1 POLR2A SMAD2 TBX15
4877014
chr17 40400711 rs77977565 T A
ELF1 POLR2A
4877015
chr17 40400712 rs76806513 C A
ELF1 POLR2A
4877016
chr17 40400843 rs115929367 G A
ELF1 IRF1 POLR2A USF1
4877017
chr17 40400932 rs114408613 T C
IRF1 POLR2A SOX4
4877018
Genes possibly regulated by vista24812[chr17:40400517-40401003]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 40271692 40306934 - CTD-2132N18.3 ENSG00000267261.1 40306934 0.97 0.99 15852 6417
chr17 40276994 40307035 - RAB5C ENSG00000108774.10 40307035 0.65 0.98 15854 6518
chr17 40308909 40333296 - KCNH4 ENSG00000089558.4 40333296 0.81 0.98 15855 32779
chr17 40336078 40337470 - HCRT ENSG00000161610.1 40337470 0.92 0.98 15856 36953
chr17 40340817 40346531 - GHDC ENSG00000167925.11 40346531 0.68 1.0 15857 46014
chr17 40351186 40428725 - STAT5B ENSG00000173757.5 40428725 0.72 0.96 15858 72278
chr17 40439565 40463961 + STAT5A ENSG00000126561.12 40439565 0.75 0.99 15859 61438
Expression level of Genes
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miRNAs possibly regulated by vista24812[chr17:40400517-40401003]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results