EnhancerDB
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  3. rs59157462[chr17:40400597]
Enhancers that have rs59157462[chr17:40400597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
chr17 40400517 40401003 vista24812
VISTA
Transcript factors that have rs59157462[chr17:40400597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398586 40401546 ZBTB33 GTRD no Lung (A549) 108259994
chr17 40400391 40401075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758449
chr17 40400391 40401075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259995
chr17 40400445 40401406 POLR2A UCSC Txn Factor no Conserved 108259996
chr17 40400449 40400949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758450
chr17 40400449 40400949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259997
chr17 40400492 40401028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758451
chr17 40400492 40401028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259998
chr17 40400503 40401067 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758452
chr17 40400503 40401067 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259999
chr17 40400504 40401120 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21758453
chr17 40400504 40401120 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108260000
chr17 40400523 40400979 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21758454
chr17 40400523 40400979 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108260001
chr17 40400523 40401067 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21758455
chr17 40400523 40401067 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108260002
chr17 40400525 40401122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758456
chr17 40400525 40401122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108260003
chr17 40400557 40400957 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21758457
chr17 40400557 40400957 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108260004
chr17 40400582 40401018 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758458
chr17 40400582 40401018 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108260005
chr17 40400583 40400919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21758459
chr17 40400583 40400919 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108260006
chr17 40400588 40400600 MEF2D JASPAR yes 21239933
chr17 40400588 40400600 MEF2D JASPAR yes 54289259
chr17 40400589 40400599 MEF2A JASPAR yes 21239934
chr17 40400589 40400599 MEF2A JASPAR yes 54289260
Genes associated with rs59157462[chr17:40400597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More