EnhancerDB
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  3. vista24846[chr17:41546132-41546290]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24846[chr17:41546132-41546290]
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Tissue distribution of vista24846
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Transcription factor that possibly regulate vista24846[chr17:41546132-41546290]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 41546127 41546133 HiNF-A TRANSFAC yes 21241606
chr17 41546127 41546133 HiNF-A TRANSFAC yes 54351333
chr17 41546153 41546159 SOX10 JASPAR yes 21241607
chr17 41546153 41546159 SOX10 JASPAR yes 54351334
chr17 41546165 41546177 TFAP2A JASPAR yes 21241608
chr17 41546165 41546177 TFAP2B JASPAR yes 21241609
chr17 41546165 41546177 TFAP2C JASPAR yes 21241610
chr17 41546165 41546177 TFAP2A JASPAR yes 54351335
chr17 41546165 41546177 TFAP2B JASPAR yes 54351336
chr17 41546165 41546177 TFAP2C JASPAR yes 54351337
chr17 41546167 41546176 TFAP2A JASPAR yes 21241611
chr17 41546167 41546176 TFAP2A JASPAR yes 54351338
chr17 41546179 41546187 RHOXF1 JASPAR yes 21241612
chr17 41546179 41546187 RHOXF1 JASPAR yes 54351339
chr17 41546189 41546198 NKX2-8 JASPAR yes 21241613
chr17 41546189 41546198 NKX2-8 JASPAR yes 54351340
chr17 41546189 41546199 NKX2-3 JASPAR yes 21241614
chr17 41546189 41546199 NKX2-3 JASPAR yes 54351341
chr17 41546190 41546198 ISL2 JASPAR yes 21241615
chr17 41546190 41546198 ISL2 JASPAR yes 54351342
chr17 41546190 41546199 NKX3-2 JASPAR yes 21241616
chr17 41546190 41546199 NKX3-2 JASPAR yes 54351343
chr17 41546203 41546209 NFE2 TRANSFAC yes 21241617
chr17 41546203 41546209 NFE2 TRANSFAC yes 54351344
chr17 41546216 41546227 NFE2L2 JASPAR yes 21241618
chr17 41546216 41546227 NFE2L2 JASPAR yes 54351345
chr17 41546227 41546241 JUN JASPAR yes 21241619
chr17 41546227 41546241 JUN JASPAR yes 54351346
chr17 41546229 41546240 BATF JASPAR yes 21241620
chr17 41546229 41546240 BATF JASPAR yes 54351347
chr17 41546230 41546241 FOSL2 JASPAR yes 21241621
chr17 41546230 41546241 JUNB JASPAR yes 21241622
chr17 41546230 41546241 FOSL2 JASPAR yes 54351348
chr17 41546230 41546241 JUNB JASPAR yes 54351349
chr17 41546231 41546242 FOS JASPAR yes 21241623
chr17 41546231 41546242 FOSL1 JASPAR yes 21241624
chr17 41546231 41546242 JUND JASPAR yes 21241625
chr17 41546231 41546242 NFE2 JASPAR yes 21241626
chr17 41546231 41546242 FOS JASPAR yes 54351350
chr17 41546231 41546242 FOSL1 JASPAR yes 54351351
chr17 41546231 41546242 JUND JASPAR yes 54351352
chr17 41546231 41546242 NFE2 JASPAR yes 54351353
chr17 41546232 41546241 JDP2 JASPAR yes 21241627
chr17 41546232 41546241 JDP2 JASPAR yes 54351354
chr17 41546232 41546243 FOSL2 JASPAR yes 21241628
chr17 41546232 41546243 JUNB JASPAR yes 21241629
chr17 41546232 41546243 FOSL2 JASPAR yes 54351355
chr17 41546232 41546243 JUNB JASPAR yes 54351356
chr17 41546232 41546246 JUN JASPAR yes 21241630
chr17 41546232 41546246 JUN JASPAR yes 54351357
chr17 41546250 41546264 RORA JASPAR yes 21241631
chr17 41546250 41546264 RORA JASPAR yes 54351358
chr17 41546258 41546262 YY1 TRANSFAC yes 21241632
chr17 41546258 41546262 YY1 TRANSFAC yes 54351359
chr17 41546264 41546278 PAX6 JASPAR yes 21241633
chr17 41546264 41546278 PAX6 JASPAR yes 54351360
chr17 41546271 41546281 BHLHE22 JASPAR yes 21241634
chr17 41546271 41546281 OLIG2 JASPAR yes 21241635
chr17 41546271 41546281 BHLHE22 JASPAR yes 54351361
chr17 41546271 41546281 OLIG2 JASPAR yes 54351362
chr17 41546278 41546282 ESR1 TRANSFAC yes 21241636
chr17 41546278 41546282 ESR1 TRANSFAC yes 54351363
SNP sites on vista24846[chr17:41546132-41546290]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 41546176 rs35546612 C T
TFAP2A TFAP2B TFAP2C
4883828
chr17 41546241 rs73984002 C A
FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
4883829
chr17 41546249 rs137983106 C A no 4883830
chr17 41546264 rs149408568 G A
PAX6 RORA
4883831
chr17 41546288 rs12601849 G T no 4883832
Genes possibly regulated by vista24846[chr17:41546132-41546290]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 41476327 41478505 + ARL4D ENSG00000175906.4 41476327 0.78 1.0 15896 30195
chr17 41561233 41621831 + DHX8 ENSG00000067596.6 41561233 0.61 0.99 15897 85057
Expression level of Genes
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miRNAs possibly regulated by vista24846[chr17:41546132-41546290]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results