EnhancerDB
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  3. rs149408568[chr17:41546264]
Enhancers that have rs149408568[chr17:41546264]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41539589 41549375 enh17170
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
chr17 41546132 41546290 vista24846
VISTA
Transcript factors that have rs149408568[chr17:41546264]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41545872 41546362 TCF7L2 GTRD no Colon (HCT116) 108261401
chr17 41545883 41546446 ZNF143 GTRD no Epithelial (MCF-7) 108261402
chr17 41545895 41546546 ZNF274 GTRD no Bone Marrow (K562) 108261403
chr17 41546016 41546412 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261404
chr17 41546025 41546481 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261405
chr17 41546081 41546371 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760905
chr17 41546081 41546371 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261406
chr17 41546086 41546342 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760906
chr17 41546086 41546342 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261407
chr17 41546088 41546364 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760907
chr17 41546088 41546364 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261408
chr17 41546092 41546412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760908
chr17 41546092 41546412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108261409
chr17 41546098 41546382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261410
chr17 41546108 41546388 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261411
chr17 41546129 41546359 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108261412
chr17 41546155 41546291 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760909
chr17 41546155 41546291 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108261413
chr17 41546250 41546264 RORA JASPAR yes 21241631
chr17 41546250 41546264 RORA JASPAR yes 54351358
chr17 41546264 41546278 PAX6 JASPAR yes 21241633
chr17 41546264 41546278 PAX6 JASPAR yes 54351360
Genes associated with rs149408568[chr17:41546264], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More